Astyanax mexicanus (Mexican tetra): 103047201
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Entry
103047201 CDS
T05042
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00260
Glycine, serine and threonine metabolism
amex00630
Glyoxylate and dicarboxylate metabolism
amex00670
One carbon pool by folate
amex01100
Metabolic pathways
amex01200
Carbon metabolism
amex01230
Biosynthesis of amino acids
amex01240
Biosynthesis of cofactors
amex04981
Folate transport and metabolism
Module
amex_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103047201 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103047201 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103047201 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103047201 (shmt2)
Enzymes [BR:
amex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103047201 (shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
103047201
NCBI-ProteinID:
XP_007253455
Ensembl:
ENSAMXG00000036404
UniProt:
A0A8B9KSX2
A0A3B1JBR8
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All DBs
Position
5:9786405..9829013
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AA seq
502 aa
AA seq
DB search
MLTLTLRQLARPLCQRGPAALSTGLRWQHSAAARAAEHDRPWTGQDSLAQDDPEMWDLLQ
KEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQK
RALEAFDLDPSRWGVNVQPYSGSPANFAAYTAVLKPHDRLMGLDLPDGGHLTHGYMSDVK
RISATSIYFESMPYKLNPKTGLIDYDQMETTAKLFRPKLIIAGTSAYARLIDYARIKKLC
TELNAYLLADMAHISGLVAAKAIPSPFEHADLVTTTTHKSLRGARAGLIFYRKGVRSVDK
KGAEVKYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQANTPMFREYIAQVIKNAKSMA
NALLKKNYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELVSITANKNTCPGDKSAITPG
GLRLGAPALTSRQFKEADFEQVVEFMDEGFKIALDVKKKTKKLAEFKSFLLEDPETVARI
ADLRHRVEAFARPFPMPGFHDH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgttgacactgacactgagacagctcgcccggcccctgtgccagcgtggccctgcagca
ttgagcacaggcctgaggtggcagcactctgcagctgctcgagcagctgagcatgacagg
ccctggaccggacaagacagtctggctcaagatgaccccgagatgtgggacctgttgcag
aaagagaaagacagacagtgtcgtggcctggaactcattgcctcagagaatttctgcagc
agagcagctcttgaggcccaaggctcctgtctcaataacaagtactcagaaggctaccca
ggaaagaggtattatggtggtgcagaggttgtggaccagatcgaactgctgtgtcagaag
cgggctctggaggcttttgatttggatccatcacgctggggtgtcaacgtgcagccctac
tcaggctcccctgccaactttgctgcttacactgctgtcctcaagccccatgaccgtctg
atgggcttggacctgcctgatggaggacatcttacccatggctacatgtctgacgtgaag
cgtatctctgctacctctatctattttgagtccatgccctacaagctcaatcctaaaaca
ggtctaatagactatgaccagatggagacgactgcaaagctgttcaggcccaagctgatc
attgctggcaccagtgcctacgcccgcctcattgactacgcccgcatcaagaagctgtgt
acagagttaaatgcgtatctgctggcagacatggcccacattagtggccttgtggctgct
aaagctattccctctccatttgagcacgctgaccttgtcaccactaccacacacaaatcc
ctcagaggagccagggctgggttaatattctatcggaaaggcgttcgctcggtggacaag
aaaggtgctgaagtcaagtatgaccttgaggacaaggtcaatttctcagtcttcccctcg
cttcagggtggaccccacaatcacgccatcgctggggtcgctgtagctctccgacaggcc
aacaccccaatgttcagagagtatattgcacaagtcataaagaatgcgaagtccatggcc
aatgctttgctgaagaaaaattacactcttgtgtcaggtgggactgataatcacctggtg
ctggtagatttgaggcctcagggaatggacggtgctcgagcagagagggttctggagctt
gtttccatcactgctaacaaaaacacctgcccaggggacaagagcgcaattacaccagga
ggcctccgactaggtgcccctgcgctgacatctcggcagttcaaagaagcagacttcgaa
caggttgtggaatttatggatgaaggcttcaaaatcgctttggacgtcaagaaaaagacc
aaaaagctagccgaatttaagagtttcctgctggaggatccagagacagtggcccgcatc
gctgacctgcggcaccgtgtggaggcttttgcccggcccttcccaatgccaggcttccat
gaccactaa
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