Astyanax mexicanus (Mexican tetra): 103047230
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Entry
103047230 CDS
T05042
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X2
KO
K08775
breast cancer 2 susceptibility protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103047230 (brca2)
03460 Fanconi anemia pathway
103047230 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103047230 (brca2)
03036 Chromosome and associated proteins [BR:
amex03036
]
103047230 (brca2)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103047230 (brca2)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103047230 (brca2)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103047230 (brca2)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103047230 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
103047230 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
103047230
NCBI-ProteinID:
XP_015463688
Ensembl:
ENSAMXG00000013027
LinkDB
All DBs
Position
18:44916910..44937645
Genome browser
AA seq
2786 aa
AA seq
DB search
MIEDFFHQIETELGPLSSDWFKELTAKASKDESFPGAVEHEALSRTEDGTFRAPQETPAL
ESQMSSTPRLFRVRGPLSPDSVLGRSPNPGMQTPLSTLPWTDSSPCLFGSAKESQRFEED
SEPLKKHNYFGLLDTPKSSLVQDSSAKRISESLGAQLHPDLSWSSNFNTPGAMSPTVILT
KKDAQPSPIVRKLFPSLSKGTESTSEITSTAHYNASLTEENAQTKGPDESFDNVEGLWRQ
TVPDAINDSDVRDTVESVLDGAEDVLSIFFSNSSSALRRVKSKERTKKRVNGVSEDVKPA
ALATQHSTDQTDQTLASNVDLDINSLNSSSTCTATEAKSPPKNKDFSQWSPLSLSQVSDA
KAKQDCTSDLANKHLNFESVNSDSGEDALKDSITQLGQFNTCEVEKQKSSPDSYPEKSQL
RSSLLAASPALTFSRKPRKFVYQVQSPFPPTKERKRNNAQESSLTTTDDLTGKHYREPFL
TAENKKHIKDDPQTSDTVGDCLVHPKEPPVKQGNPGALNVDHGLDMTQLCNAFAEDFTQE
ISLEKSAVNTECDNDVHTMSTCMSDAIKIDEVQTKAESVLHSDDGAEHLEFPANHKEASA
LAEESINLTSRSRMENTLSESLKHENGYPAVFNDVSGLSSSCNDGADKYLYSGFKTANNK
LIHVPPEAVMKAKATFEDFVDLEESMNTAVRSDGLNTGSGTALNSSVVSTWSSERYSHAL
NKPEREPTGNLLHGSLDVASGCTSTSYLPKTNDSGFKTASNRSITISSVNLEKAKDIFKE
LEVENLYKTDICPSSNSAELEIQVMKNAKVPKLDIKRNVDGNYVLTASQKADVTELCSML
EDADSQYEFTQFRQAKPCSKSMESSRSEREWDPEILSGIDFDDSFNCDTERQLPRKWPVR
PDLPTQNGPVSNSMKNGEVFTQSKETPKAELSLNDYRLTLRSDGREMAKTPAVQTNTSEG
NEPVCVGFKTARGNSVRISEKNLTKARSLFADLEDCVGKIGLKSDHNSVTAQVTTKQTKH
NQNSPEACGDGLLCQKEKTKTETGIEPRSEENVRNGNTSLVTDNKDDVCKQICSTENPED
QDNPQGTKQNEKPDLLVDTRHCGFSTAGGKELKVSESSLLKAKKLLNKVSDQCEAVPSIK
APPNRVTTLKVANINLQPSVCSNSKVSENVFPHNLKMSCKSLTGNSKDQMFRNSESHHRL
SEIEHQTTAKYQSTKSIQSSGFKMASCKGVSFSSSAIEKSRAIFRDLDSLIAEDGSNETK
SMDENAKLHDEAERSQCKFANGFKMASGKGVSFSEGAFLKSKAFFKDCDADYPDHSQGKG
DQSSVMDNCGFKALVGNTVHLPEIDSPNKEIVGLKDEATVLNKYVEKEFVPTSAPEILQF
TSGCGFSTASGKMVSVSAEALQKAKAVLDDSSAASPCEIKADVSEEKNKKGVPKTDTYIP
GRSLGFSTASGRKVAISDRALEKAKNLFASCEVEDLANNGITLNSAQTKPLGSEQTRCLG
FSTASGKGVAVSEKTLKEAKAVFAGCEDILETADVHKPLKTGRVVEEKDKGSLNQSLTNR
EFQTCESANFRLSSGKCEEINNANKSNVKVEQFGFSTASGKGVSVSKSALKVAFEMFRDC
DVQPITEEQHPVAQIDCPSSSDETRRHTTDTTTLSLSTQAIRDDSSLLNSHALSLNGCTM
TQQKYLEQEAMACTKALLEDDFNEHSRSEPVEETVIRKCPTLAEQRSYEVIIGERKRTSD
ADLTGQPPLKRRLISEFDQISDGTRVCVPVKSSPNGTLTDRRVFKGNVHLKPNITHPSRN
IMDQNASKALDGEKRRPSNPKAVIFIPPFQKNIKPTRKVPTNYVSRDNAKVPTMFIPPVK
KNPMSNVLQGNSIQSCTDSDCEKLEKEDTLEVKPNTAGNHDSEPEKKEKEVEEDVRIEDR
ASVTCEEKDNESWSQSLELARDMQDMRIRKKKRQTIRPLPGSIYLAKTSGVTRISLREAV
NNKCPLLHSQEKLYQYGVHCQVSQITAENAELFRFNFDDFFKREMFIDNTGVQLADGGWL
IPDNRGTVGKEEFYKAMCDTPGVDPKLMSEAWVFNHYRWVVWKRACMERTFPEVMGGRCL
TPEQVLLQLKLRYDTEVDNSRRSALKKIMERDDTPAKTLVLAVCGFAKSSSSPVNSEKAV
GTPDSKTSESTAAIIWLTDGWYSIKALLDPPLSSMLQKGRLSIGGKVMIHGAELIGSQDA
CLPLEAPDSLMLKISANSTRRARWDSKLGFYKDPRPFSLPLSSLYSNGGVVGCVDVIVLR
SYPTQWMEKRTGGVFVFRNERAEDREARRHSSAKQKTMELLFTRIQAQFEKEEEEKKKTR
RRKRFRRCDIHSMQDGEELYEAMENDPAYVEAHLSAQQMEAVSSYRRVMADRRQVQLQER
MQKSVQEAQESEGLCPNRDVTPVWKLTIADFSDLHSNCTYTLNIWRPSLELRSLLKEGCR
YKAYYLSTSETKKRSGTANVQFTATKKTQFQDIEVCPEWLMANFPARQFTIFRDLQNSAF
SSPCGEVDVVGYVISILDRQGASPVLYLVDDKFDFVSVRSFSSLVQLALEDLVKPLTLLA
ISNLQLRELSGPVPRLYAGEQALFSVNPKEAHLQEAMAHLKTFVQSYENFFSVAEEKLSN
LLPSGSVKPAQSPRTLGLSSVPKLNSRINVTPQPPKVHSPFTPVSRRAPTPTDQTTEPKD
PKSLKRKRGIDFLSRVPSPPPLNPLNILTSPNVKKTFNPPRRSETNRPARRDPAPSRRSA
SLAPSVEEQWVNDEELAMINTQTLLD
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacttctttcatcaaattgaaacagagcttgggcctcttagttctgattgg
tttaaagagctgacagcaaaagcgtctaaagatgaaagtttccctggggctgtggagcat
gaggccttgtcacgtacagaagatggcacatttagagcaccgcaggaaacgccagccttg
gagagtcagatgtcttcaacacccagattatttagagtcagaggtccactgtctcctgat
tcagttcttggacgttcccccaatccaggaatgcaaaccccattgtcaactttgccgtgg
acggactcaagcccatgcctgtttgggtcagcaaaagaaagccagaggtttgaagaagac
agtgaaccactaaagaaacataactactttggtctgctcgacactccaaaaagttcgctg
gttcaagattcatctgcaaaacgcatctctgagagccttggagctcagctacatcccgat
ctgtcgtggagcagcaacttcaacacaccaggagcaatgagccctacagtaatattgacg
aaaaaagatgctcagccttcaccaattgtacggaagctctttccatccctctcaaaaggc
acagaatcaacatctgaaattacgtccactgcgcattacaatgcatcacttacagaagaa
aacgcccaaacaaaaggacctgatgaatcgtttgacaacgtggaaggtctttggaggcag
acggtacccgatgctataaacgacagtgatgtccgcgacacggtggagagcgttcttgat
ggtgctgaggatgttctgtccatcttcttcagcaacagcagctcagctctgagacgggtt
aaatctaaagaacgaacaaagaagagggtaaatggtgtttctgaggatgttaaaccagct
gctctggcaacacaacactctacagatcagacagatcagactttagcctcaaatgtggat
cttgatataaactccttaaactcatccagtacatgcactgctactgaagctaaaagccct
cctaaaaacaaagacttctctcagtggtctccactaagtttatcccaagtttcagacgca
aaagcaaagcaagactgcacttcggatttagcaaacaagcaccttaattttgagtctgtt
aacagtgattcaggagaggatgctcttaaagacagtatcacacaacttggccagtttaat
acttgcgaagttgagaagcagaagagctctcctgattcatatccagagaaatctcagctg
agaagttccctgttggctgcatctcctgcactgaccttttccagaaaacccaggaagttt
gtgtatcaagtgcaaagcccatttccaccaaccaaggaaaggaagcggaataatgcacaa
gagtcctcacttacaaccactgatgatctgactggaaaacactacagagagccatttctt
actgctgagaacaaaaaacacattaaagatgacccacaaacatcagatactgttggagac
tgtttggtgcatcctaaagaacctccagttaaacagggtaatccaggtgccctcaacgta
gaccatggcctcgatatgacgcagctttgcaacgccttcgcagaagattttactcaggaa
atcagtttggaaaaatcagctgtgaatacagaatgcgacaacgacgttcacactatgtca
acttgcatgagtgatgcaataaaaatagatgaagtacaaactaaagcagaatcagtgctg
cacagtgatgatggtgcagaacacctggaatttcctgccaatcacaaggaagcatcagct
cttgcagaggaatcaatcaacctgacaagcaggtcaaggatggagaatacactttctgaa
agtttgaaacatgaaaatggctatccagccgtctttaatgatgttagtggattatcttca
tcttgtaatgatggtgctgacaagtacctttattctggttttaaaactgcaaataataag
cttatacatgtgccccctgaagctgtaatgaaggccaaggctacgtttgaagattttgta
gatttggaggaaagtatgaacactgcagtcagatcagatggattgaacactggatcagga
acagcattaaacagctcagttgtttcaacgtggtcttcagaaagatatagccatgcacta
aataaacctgaaagagaaccaacaggtaatttacttcatggaagtttagatgtagcctca
gggtgtacctctacttcttatctaccaaaaactaatgattctggtttcaaaacagcctca
aacagaagtatcaccatctcctctgttaatctggagaaagcaaaagacatttttaaggaa
ctagaggtagaaaacttatataaaactgatatatgtccatcatcaaactctgccgagttg
gaaatccaagttatgaaaaatgccaaagttcctaaacttgacatcaaacgaaatgttgat
gggaactacgttttgacggcatcacaaaaagctgatgtaacagaactgtgcagtatgctg
gaggatgcagacagccagtatgaatttactcagttcagacaagcaaagccttgttcaaaa
tcaatggaaagcagtcgttctgagagagagtgggatcctgagatactgtctggtatcgac
tttgatgatagtttcaactgcgatacagaaagacaactgcccagaaagtggccagtcaga
ccagatctgcccactcagaatggtcctgtatcaaacagcatgaaaaatggggaagtattt
actcaaagtaaggaaacgccaaaagcagaactttccttgaatgattaccgtttgactttg
aggtcagatggtagagagatggcaaagactccagcagtacaaactaacacaagtgaagga
aacgagccagtctgtgttggcttcaaaacagctagaggaaattctgttcgtatctctgag
aaaaatctgaccaaggcgaggagtctcttcgcagatctggaggattgtgtaggaaaaatt
ggtctgaagagtgaccacaacagtgtgaccgcacaagttactactaaacaaactaaacac
aatcaaaactcacctgaagcttgcggtgatggtttgctttgccagaaggaaaaaactaaa
actgaaactggaattgaacccaggtcagaggaaaatgtgcgtaatggaaatactagcttg
gtcacagataataaagatgatgtatgcaaacagatatgcagcacagaaaatccagaagat
caggacaatcctcaaggtactaaacaaaacgaaaagccagatttactggttgacacaaga
cattgtggattcagtacggctggaggaaaggagttgaaagtttcagaaagctctctactg
aaggcaaagaagcttttgaataaagtttctgaccagtgtgaagccgtaccctcaatcaaa
gcccctccaaatagagtgactactctaaaagttgccaatattaatctgcagccttctgta
tgttctaattctaaagtgtctgaaaatgtatttcctcataatttaaagatgtcttgtaaa
tctttaactggaaatagtaaggaccaaatgttcaggaactctgaatctcatcacagattg
tctgaaatagaacatcagacaacagctaagtatcagagtacaaaatccatacaaagcagt
gggtttaaaatggccagttgcaaaggagtatccttttcctcaagtgctatcgagaagtcg
agggccatatttagagaccttgatagcttgattgctgaggatggctcaaacgagaccaaa
tcaatggacgagaatgcaaaattgcatgatgaagcagaaagaagccagtgcaaatttgcc
aatggattcaagatggcgagtggtaaaggggtgagcttttctgaaggagcttttctgaaa
tcaaaggctttcttcaaagactgtgatgctgattacccagatcactctcaaggcaaaggg
gaccagtcaagtgtgatggataactgtggcttcaaggcacttgtggggaacacagtacat
ttgcctgaaatagacagcccgaacaaagagattgtaggtttaaaggacgaagccacagtt
ttgaataaatatgtcgagaaggaattcgttccaacctcagctcctgagatccttcagttc
acatctggctgtggttttagtacagccagtggtaaaatggtatctgtttcagctgaagca
cttcagaaagctaaagctgtgcttgacgattctagtgctgcttcaccttgtgaaataaaa
gcggacgtttcagaagagaagaataagaagggtgttcctaaaacggatacttatattcca
ggaagaagcttaggctttagtactgcaagtggaaggaaagtggccatatctgaccgtgcc
ctggaaaaagccaagaatctttttgctagttgtgaagtggaagatttagcaaataatgga
ataactttgaattctgcacaaaccaaaccactcggctctgagcaaaccagatgtttgggg
ttcagcactgccagtggtaaaggagtggctgtgtcagaaaagactctgaaggaggctaaa
gctgtgtttgcaggttgtgaggacattttggaaacagctgatgtgcacaagcctctaaaa
actggacgagtagttgaagaaaaagataaaggctctcttaaccagtctttgactaatagg
gagtttcagacgtgtgaatctgctaattttaggctttctagtggaaaatgtgaggagata
aataatgctaacaaaagtaatgttaaggttgaacagtttggtttcagcacagccagtgga
aaaggtgtgtcagtgtcaaaatcagcccttaaggtggcatttgagatgttcagggattgt
gatgtacaaccaattacagaggaacagcatccagtcgcccagattgactgtccgtcatca
agtgatgaaactagaagacataccacagacactactaccttatcgctttccacacaagcc
atacgagacgattcctccttactgaacagtcatgcattgagtcttaacggatgtaccatg
acccagcagaagtatctggaacaggaagctatggcttgtactaaagccttgttggaggat
gattttaatgagcacagtcgatcagaacctgttgaggaaactgtcatcaggaaatgtcct
actctcgcagagcagaggtcctatgaggtgatcataggagaaagaaaacgaacgtctgat
gctgatttgacaggccaacctcctttgaaaagaagacttatctcagagtttgaccagatt
tccgatggtacaagagtttgtgttcctgtgaaaagcagtcccaatggaactctaacagac
agaagagtcttcaaaggaaacgttcacttgaagcccaatattactcatccatccaggaac
atcatggatcaaaatgcttcaaaagctttagacggcgaaaaaagaagaccatcaaacccc
aaggctgtgatctttatacctccatttcagaagaatattaaaccaacaagaaaagtgcca
acaaattatgtttccagagataatgccaaagtgcccactatgttcatcccaccagttaag
aagaacccaatgtcaaatgttcttcaggggaactcaatacaaagttgtactgattctgac
tgtgaaaaactggaaaaggaggatactctagaggtgaagccaaacacagctgggaatcat
gattctgagcctgagaagaaggagaaagaagtcgaggaagatgtaagaatagaggatcgg
gcctctgtaacttgtgaagaaaaagataatgagtcctggtcgcagtctttggagttagcg
cgggatatgcaggatatgagaattcgaaagaagaagcgccaaaccattcgacctctacct
ggcagcatttacctggctaagacttctggggtgaccaggatctcactgagagaggctgta
aataataagtgcccacttctgcactctcaggaaaagctttatcagtacggtgtacactgc
caagtctcccagatcacagctgaaaacgcagagttattcaggttcaactttgatgacttc
ttcaaacgtgagatgttcatagacaacactggtgtccaactcgctgatggtggctggctg
atcccagataacagaggaaccgtaggcaaggaggagttttacaaagcgatgtgtgacact
cctggtgtcgaccccaaactgatgagtgaagcctgggtgtttaaccactatcggtgggta
gtatggaaacgggcctgcatggaaaggacatttccagaagtgatgggtggacggtgtctc
actcctgaacaagtccttctgcagcttaaactcagatatgacactgaagtggacaacagt
cgaagatcagctctgaagaagatcatggaaagggacgacaccccggcgaagactttagtg
ctggctgtgtgtggttttgccaaatccagctccagtccagtgaattcagagaaagctgta
ggaacccctgattctaagacgtcagagtcgactgccgctatcatatggctcactgatggc
tggtattccattaaagccctgctggatccaccgctctcttcaatgctgcaaaagggccgt
ctcagcattggagggaaagttatgatccatggggcggaactgattggctctcaagatgct
tgccttcctttagaggctcctgattcactcatgctgaagatttcagctaacagcacgaga
cgagcccgctgggactccaaactgggcttctataaagaccctcgacccttctcccttcct
ctatcctcactgtactctaatggaggagtcgtgggctgtgtggacgtcattgtattgagg
agctacccaactcagtggatggagaaaaggactggtggagtgtttgtgtttcgcaatgag
cgagctgaagaccgagaggccagacgccacagcagcgccaagcaaaagaccatggagctc
ctgttcacaaggattcaagcccagtttgagaaagaggaggaagaaaagaagaaaaccaga
agaagaaaaagatttcgtcgctgtgatattcacagcatgcaggatggggaagaactttac
gaagcgatggagaacgatccagcttatgtggaggctcacctgagtgcacagcagatggag
gctgtgagcagttacaggcgtgtaatggctgatcgcaggcaggtgcagttgcaggagcgc
atgcagaagtctgtgcaggaagcgcaggaatctgagggcctctgtccaaacagagacgtt
acacctgtctggaaactcaccatcgctgatttcagtgacctgcacagcaactgcacatat
acactgaatatctggcgcccttcactggaactgcgctccttactgaaggagggctgcaga
tataaggcctattacctgtccacatctgagaccaagaaacgctcaggcacagccaacgtt
cagttcactgccaccaagaaaacacagtttcaggatattgaggtttgtccggagtggtta
atggcgaattttcctgcaagacagtttactatcttcagagatcttcagaactctgcattc
agttctccatgtggagaggttgatgttgtcggatatgtcatctctatcttagacagacaa
ggtgcctctccagttttgtatttggtggatgacaagtttgactttgtctccgtgagaagc
ttcagcagtctggtccagctagctctggaggacctggtaaaaccattaactctcttggct
ataagcaacttgcagctgcgggagctctctggtcctgttccaaggctttatgctggagaa
caagctttattctctgtaaaccccaaagaagcccacttgcaggaagctatggctcatctg
aagacctttgtccagagttatgaaaatttcttcagtgtcgctgaggaaaagctctcaaac
ttgcttccgtctggttctgtgaagcccgcacagtccccaagaactctaggactgtcatct
gtgcccaagctgaacagcagaatcaatgtaacgccccagccgccaaaagttcactctccc
ttcacgccagtgtccaggagagctcctacacccaccgatcaaaccaccgagcctaaagac
cccaagagtctgaaaagaaagagaggtatagacttcctgtcacgtgtcccttctccacca
cctctcaatcctctcaacatcctcacttctcccaacgtcaagaagacgttcaacccaccc
agaaggtccgagacgaaccggccagcccgcagagatccagctccatcccgtcgttctgct
tcacttgctccatctgtggaggagcagtgggtgaatgatgaggaactggccatgattaac
actcaaaccctgctagactga
DBGET
integrated database retrieval system
