Astyanax mexicanus (Mexican tetra): 103047299
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Entry
103047299 CDS
T05042
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103047299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103047299
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103047299
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
HECT type E3
103047299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
103047299
NCBI-ProteinID:
XP_022540212
Ensembl:
ENSAMXG00000005512
LinkDB
All DBs
Position
7:47613829..47678201
Genome browser
AA seq
1093 aa
AA seq
DB search
MLCWGSSAWGQLGLGDAEPVVAEPRSCRMFSGRGLKEVACRGQHSLFLLHDGSVYSCGSN
SHGQLGHEKPGNKPELVVALDAQKIAGVACGDAHSLAVNEQGQVFAWGTGEKGQLGLGTV
EEAVRVPRLIKKLCEHRISQVMCGNQHCIALAKDGQLFTWGQNSSGQLGLGKGEPSSLSP
QPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGNGSRGQLGHDSTNNELLPRRVLELMGTEVSQIVC
GKHHTLAFVPSTGLVYAFGCNAHGQLGLANRGNARIPLPVRNIQPPYLSSSQTSDRKSRP
ENRSSIIRRILACFSRSSARVSPHSAEQMAAIESGDLGNSDSDTDHYIPSRIHCGGDHSF
LLLSREKNCPEDFRIINTSKSISLINDESLNSWRVRLLDGADSSITNDVILLLSSTACWN
ASFLDQSDDGHFKTNPKVPGIDLNSVRLLFETLMKPSYSRLLEQTTKSFESLLIPQLPCS
PPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDANPSKVLDNWWSLVDCEVFS
RLVEMYKSIVVFLLTGGKALLIPVFLESYISATLRLLEKLHKVNQKAHHVEYNRFYIPDI
TSLVDIQEDYLKWFLSKAEIKMRSPPVQNSVTLCAYPFILNAQAKTTMLQTDAELQMQMA
VSGANLHNVFMLLTLEPLLAQNPFLVLHVRRNHLVSDALRELTIYNDVDLKKPLKVIFDG
EEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYSESNLLWFSDKCFVEHNWFNLIGIVCGL
AIYNSTVVDLHFPLVLYKKLLDVSPSLDDLKELSPTEGRSLQQLLDYEGDDIEETFCLNF
AITREHYGMTEVKELVPGGENITVDRSNREEFVQAYLRYVFSDSVQELYSAFSGGFLKVC
GGRILSLFQPSELMAMVVGNSSYNWEELEKNAVYKGEFSASHPTVRMFWEVFHDFPLEKK
KQFLLFLTGSDRIPIHGMASLRIVLQSTSAAEHYLPVAHTCYNLLDMPCYKTKETLHLRL
TRAIEQYEGFSLV
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggcagttcagcatggggtcagctgggcctcggcgatgcggagcccgtc
gtggctgagccgaggagctgccgtatgtttagcgggagggggctgaaggaggtggcctgc
agaggacagcactcgctcttcctgctgcatgatgggagcgtgtattcgtgcggctccaac
agccacggtcagctgggccatgagaagccaggaaacaagccagagttggtggtggccctg
gatgcgcagaagattgcgggtgtggcgtgtggagatgcccactctctggcggtgaatgag
cagggtcaggtgtttgcatggggcaccggagagaagggtcagctcggactgggcacagtg
gaggaggctgtgcgagtgcccaggttaattaaaaagctgtgcgagcatcgaatatcacaa
gtcatgtgtggcaaccagcactgcatagcacttgctaaagatggtcagctgttcacatgg
ggtcagaactccagtggtcagctgggtttggggaaaggtgagcccagctctctgtctcct
cagcctctgaagtctctgtgcgggatcccgttggctcagatcagcgcaggtggagaccac
agctttgccctgtctctgtctggagccgtgttcggctggggcaggaacagcgctggacag
ctgggcctcaatgacgagcaagatcgagctgttccctgccacattaaatttctccgctcc
caaaaagtggtctacatcagctgtggggacgagcatacggctgccttgaccaaggacgga
ggcttgttcacgtttggaaacgggtccaggggacagctaggccatgattccaccaacaac
gagcttctgccacgcagagttttggagctcatgggcacggaggtttcgcaaatagtttgt
ggcaagcaccacaccttagcgtttgtcccctccaccggcctggtttacgcctttggctgt
aatgctcatggccagcttggcttagcaaacagaggaaatgccaggatccctctcccagtc
cgaaacatccagcctccatatctcagcagctcacaaacatcagacaggaagtccaggcca
gagaacaggagcagcatcatcaggagaatactagcttgtttcagtagaagctcagccaga
gtctcaccacactcagcagagcagatggcagcaattgaatcgggtgatttaggaaacagt
gactcagacacagatcattacatcccgagcaggattcactgcggaggtgaccacagcttc
ctgctgctgtcacgtgaaaagaactgcccagaggacttccgcattattaacacctccaaa
agcatttctctgattaacgatgagagtctaaatagctggagagtgaggcttctggacggt
gcagactccagcataacgaatgacgtcatcctgctgctgtcctcaactgcatgttggaat
gccagctttctggaccagagtgatgatggccattttaaaaccaaccccaaagtccccggc
atcgacctcaactcagtcaggctgctgtttgagaccctaatgaagccgtcctactcacgt
ctgctggagcagaccactaagagcttcgagagcctgctaatccctcagctgccctgctcc
cctcccgacgtggaagccatgcgcatctaccttatcctgtctgagtgtccggctctccac
gactccaaaaactacatctctctgaccatccctctcgccatggccatcctcagactggac
gctaaccccagtaaagtgctggataactggtggtcgctggtggactgtgaagtgttctcc
aggctggtggagatgtataagagtattgtggtgtttctgctcactggtggaaaggccctt
ctcatccctgtgtttttggagagctacattagcgctaccctaagattactggagaaactg
cacaaagtgaaccagaaagcgcatcatgtggagtataaccgcttctacatccccgatatc
accagtctggtggacatccaagaagactacctcaagtggtttctgagcaaagctgagatt
aaaatgcgttctcctccagtacagaattctgtcacgttatgtgcctatccgttcatattg
aacgctcaagccaagacaaccatgttgcagacagatgctgagctgcagatgcagatggcg
gtgagcggcgccaacctgcacaacgtcttcatgctgttaaccctggaacctctgctggcg
cagaacccctttttagttctccacgttcgtaggaaccacttagtcagtgacgcactgcgg
gagctaaccatctataatgatgtggacctgaagaagcccctgaaggtgatctttgatggt
gaagaggcggtggatgcaggaggagtcaccaaggagttcttcctgcttttgctaaaggag
ctgctggacccagtgtacggcatgttcacccattactccgaatccaacctgctctggttc
tctgataaatgtttcgtggagcacaactggttcaatttgattgggatcgtctgcggcctg
gccatctataactccactgtggtggacctgcactttcctctcgtgctttacaagaaactt
ctggatgtttctccttctctggatgacctgaaggagctgtcaccaaccgagggcaggagt
ctgcagcagctgttggactatgagggagatgatattgaagaaacattttgtctcaacttt
gctattactcgggagcattatgggatgactgaggtgaaggagctggttcctggaggagag
aacatcacagtggaccggtccaacagagaggagtttgtgcaggcgtacctgcgctacgtg
ttcagtgacagtgtgcaggagctgtactctgctttctcagggggtttcctgaaggtttgt
ggtgggaggatcctctcgctgttccagccctccgagcttatggccatggtggtgggcaac
agcagctacaactgggaggagctggaaaagaatgcggtttataagggcgagttctcagcc
tctcatcccacagtgcggatgttttgggaggtgttccacgactttcccctggagaagaag
aagcagttcttactgttcctgacgggcagcgaccgcatccccatccacggcatggccagc
ctgcgcatcgtcctccagtccacgtccgcggccgagcactacctgcccgtggcccacacc
tgctacaacctgctggacatgccctgctacaagaccaaagagacgctgcacctgcggctc
acccgcgccatcgagcagtacgagggcttcagcctggtctga
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