Astyanax mexicanus (Mexican tetra): 103047307
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Entry
103047307 CDS
T05042
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103047307 (top1b)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103047307 (top1b)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Topoisomerases
103047307 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
103047307
NCBI-ProteinID:
XP_007233883
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Position
13:complement(49220412..49264654)
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AA seq
771 aa
AA seq
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MSGDNGHRHHQMDSGSRSNDSHKHKDKHRDKEHKHKEHKEHKKDKEREKSKHSNSDHRDS
SEKKHKDREKDREKVKHRESSSDKHKDKDKEKRREEKIKSPSSEGKHKREKENGFSSPLH
IKTEEDNGYCYSPKHEKPPKRERDEDESDYKPKKIKTENEKKVKKRKQEEDYDNYGEEED
IKPKKKLKGKKEEVAGGKKKAKKEPEEKWKWWEEERYTDGSKWRFLEHKGPVFAPPYEPL
PDNVRFFYDGKAMKLSESAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSEEKSKI
TDLNKCNFREMSEYFKAQTEARKQMTKEEKLKIKEENERIVQEYGFCLMDNHKERIGNFR
IEPPGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHPKPPPGTRWKEVRHDNKVTWLV
SWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARQLKKCVERIRAQYHEDWKSKEMRIRQ
RAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPELDGQDYVVEFDFLGKDS
IRYYNKIPVEKRVFKNLQLFMESKQPEDDLFDRLNTSILNKHLQELMEGLTAKVFRTYNA
SITLQQQLKQLTSPEENAPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAK
KQQLSAAKKELKSAKVDAKTMHDEKSRKALETKKKAVARLSDQLMKLEVQATDREENKQI
ALGTSKLNYLDPRISVAWCKKWGVGIEKIYNKTQREKFAWAIDMADEDFEF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggacaacggacacaggcaccaccagatggactctggatctcggtctaacgat
tcccacaaacataaagacaagcaccgagacaaagagcacaaacacaaagagcataaagag
cataagaaagacaaggagcgggagaaatccaagcacagcaacagtgatcacagagactcg
tccgagaagaagcacaaagaccgagagaaggatagagagaaggtgaagcacagagagtcg
agctccgacaaacacaaagataaagataaagagaagaggagggaggagaagatcaagtct
cccagttctgaagggaagcataagcgagagaaggagaacggtttctccagccctcttcac
attaaaacagaagaggacaatggctactgctactcccccaaacacgagaagcctccgaaa
agagagagggatgaggacgagtctgattacaaacccaaaaagatcaaaacagaaaacgag
aagaaggtgaagaagcggaagcaggaggaggactacgacaactacggagaggaggaggac
atcaaacccaagaagaagctgaaggggaagaaggaggaagtagccggggggaagaagaag
gccaagaaggagccggaggagaagtggaaatggtgggaggaggagagatacacagacggc
tccaagtggaggtttctggaacataagggtcctgtgttcgcgcctccatacgaacccctc
ccagataatgttagatttttttatgatggtaaagccatgaaactgagcgagtctgcagag
gaggtggcgacgttcttcgctaagatgctggaccacgagtacacgaccaaggacatcttc
aggaagaacttctttaaagactggaggaaggaaatgacctcggaggagaagtcaaaaatc
acagacttgaacaagtgtaacttcagagagatgagtgaatacttcaaagctcagactgag
gctcgcaaacagatgactaaagaagagaagctgaaaatcaaagaagagaacgagcgaatc
gtgcaggagtacggattctgccttatggataatcacaaggagcgcatcggaaacttccgt
attgagccgcctgggcttttccgaggccgaggagatcatccaaagatgggcatgctgaag
agacgcatccggcccgaagacatcatcatcaactgcagcaaagactcgaagcatcctaag
cctcctcctggtactcggtggaaggaggtccgtcatgataataaagtgacctggttggtg
tcgtggacggagaacatccagggctccattaaatacatcatgctgaaccccagctccagg
attaagggagagaaggactggcagaagtacgagacggcacgtcagctgaagaagtgtgtg
gagcgaatcagagcgcagtaccacgaggactggaagagtaaagagatgaggatcagacag
agagccgtcgctctctacttcatcgataagctggctctgagagcgggtaatgagaaggag
gagggtgagacggcggatacggtgggctgctgctctctcagagtggagcacattaaactg
taccctgagctggacggtcaggactacgtggtggagttcgacttcctgggaaaagactcc
atccgttactacaacaagatacctgtggagaagagggtgtttaagaatctgcagctgttt
atggagagtaagcagcctgaggacgatctgttcgaccgtctgaatacatcgattctgaat
aagcatctccaggagctgatggaaggactgacggccaaagtgttccgtacctacaacgcc
tccatcaccctacagcagcagctcaaacagctcacctcccctgaagaaaacgccccagcg
aagatcctctcctacaacagagctaacagagctgtcgctattctctgtaaccaccagagg
gcgccacccaagaccttcgagaaatccatgcagaacctgcagaccaaaatcgatgcaaaa
aagcagcagctctccgcagccaagaaagagctgaaatcagccaaagtagacgccaagaca
atgcacgacgagaagagcagaaaggcgttggagactaagaagaaggcggtggcgaggctg
tctgaccagctgatgaagctggaggttcaggccaccgaccgcgaggagaataaacagatc
gctctgggcacgtccaagctcaactacctggacccgcgcatctcagttgcctggtgtaaa
aagtggggcgtgggcatcgaaaagatctacaacaaaacccagcgtgagaagttcgcctgg
gccatcgacatggccgacgaagactttgagttttag
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integrated database retrieval system