Astyanax mexicanus (Mexican tetra): 103047368
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Entry
103047368 CDS
T05042
Symbol
fcho1
Name
(RefSeq) F-BAR domain only protein 1
KO
K20042
F-BAR domain only protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103047368 (fcho1)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
103047368 (fcho1)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
103047368 (fcho1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
GMIP-like_FCH
FCH
Adap_comp_sub
SHE3
Prominin
Motif
Other DBs
NCBI-GeneID:
103047368
NCBI-ProteinID:
XP_022525923
LinkDB
All DBs
Position
12:5564319..5650672
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AA seq
1152 aa
AA seq
DB search
MEMAYFKNNFWGEKNAGFDVLYHNMKHGQIATKELAEFVRERAAVEETYSKSMSKLAKMA
SNGSTLGTFAPMWDVFRVSSDKLALCHLELMRKMNDLIRDINKYGDEQAKVHRKTKEEVM
GTLEAVQTLQVQNGHLQKSREGYHAKCTELERLRKEGAPQKELEKAELKSKKAAESFASS
IEKFNRAGGDFEQKMSESAQKFQDIEEAHLRQMKQLIKGYSHSIEDTHVQVGQVHEEFKQ
NVENIGIGSLIQKFTEQKGTGKDRPVPVGFEEYLSSQLPDNNKKSRAKAFRIPGLGKRDK
EPDSTDSALTDAPNSPLEVDDEGFVIRAAVNQNGCVEEKENNFYSSDSDFDDEEPKKFHI
QIRPVASSTRSNSAANELELKATVGALTLPPNRGAREGAGVSVKRHLSRNSSTAGRSEGE
GDGAPHRDGEQEGLRRSTSSPDHSRLSSTASGSDSLFGPPLESAFKSHSFAGREQLQSAF
PSSEYAAFSSDSSSPENVEDSGLDSPSHQPLGASPEPTGWAAWPAAPQPKDSMSLGRPSD
PFLAAFRDPSPGRSPLPLENPASTPAFTFPAFSRSLAAPELESSVWSCKHIPPEDPFLAA
FERSSSQDTRTPPETAWAPPPPRSSRDSRTDPFTKPLNDTKSLPPPSSSSSSRKDRERKR
DHSVPPPDSSSSDDPFAITMIGSPTHQSALAAAQVATGPTRTTVVSPKPAPTPAQPKKEL
VHWSSLHNPFSEGVPTGGVSAGTVQETSRKQSRSCDEPRRNGPPLTRHSGPQEDLCFSTD
KDQNCLDINTHTASQRSFRQDSSELLVLAPPQPTRSKRSSARLSGCERSRSLCSSPLPEP
SPPPSSSSSSSPSDWGGQTRAPSPARGLSRGPSPISLSTQEAWPVAAAITEYINAYFKGG
EHNRCLVKITGDLTMSFPAGITRIFTANPNAPVLSFRLVNISRVDHFLPNQKLLFSDPSQ
NDPDSRDFWFNMQALTFHLQREAELNPQASYYNVGLLKYQVSSQDPARAPLLLSAECQRS
GTVTRVSLDYHCCPATAPATQLTAVQVLLPLDHTATDLQCQPPASWNAEERRLLWKLPNL
SPTNHSKGSGTLCASWQCLEVPRGPPPSLAVQFVGSGASLSGMDVELVGSRYRMSLVKKR
FATGKYMAGCSL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggagatggcgtacttcaagaacaatttctggggggagaagaatgcggggtttgacgtg
ctctatcacaacatgaagcacgggcagatcgccaccaaggagctggcggagttcgtcagg
gagagggctgctgttgaggagacgtactccaaatccatgagcaaacttgccaagatggcc
agtaatggaagcacacttggcacatttgctccgatgtgggatgtctttcgggtgtcatca
gataagctggctctgtgccacctggagctgatgaggaagatgaatgacctcatccgtgac
atcaacaagtacggcgatgaacaggccaaagttcaccgaaagacaaaggaggaggtgatg
ggcaccctggaggctgtccagactctgcaggtgcagaacggtcacttacagaagtccaga
gagggctaccacgcgaaatgcacggagctggagcgcctgaggaaggaaggagctcctcag
aaggagctggagaaggctgagctgaagtctaagaaggcagctgagtcttttgcatcttct
atagagaagtttaaccgcgctggtggagactttgaacagaagatgagtgagtctgcacag
aagttccaggatattgaagaagcccacctacggcagatgaagcagctgatcaaaggctac
tcgcattccattgaggacacacacgtacaagtgggacaggttcatgaggagtttaagcag
aacgtggagaacattggtattgggagcctaatccagaagttcacagagcagaagggcaca
ggcaaagacaggccagtccctgtgggatttgaggagtacctatcttctcagttgccggac
aacaacaagaaaagtcgcgccaaagccttcaggatacctggcctgggcaagagggacaaa
gaaccagactccacggattctgcactgactgacgccccgaattctcctctggaggtggac
gatgaggggtttgtcatccgagcggctgttaatcaaaatggctgtgtggaggagaaggag
aataatttttattccagtgattcggattttgatgacgaggagccgaagaagttccacatt
cagatccggccagtggccagcagcacccgcagcaactcagcagccaatgagctggagctg
aaggccaccgtcggggcactgaccctgccccctaatcgaggggcaagagaaggggcgggg
gtgtcggtcaagaggcatctttccaggaattccagtacagcaggtcgttctgaaggggag
ggggatggcgccccccatagggacggggagcaggagggtctgcgcagatccacctccagc
ccagatcacagcaggctgagctccacagcctctggttcagactcgctgttcggtcctcca
ctggaatcagccttcaaatcccacagctttgcaggacgtgagcagctccagagcgccttc
ccttcttctgaatacgctgctttctcctctgattcctcttctcccgagaacgtggaggac
tctggcttggactcgccatcccatcagcccctgggagcttctccagaacccaccggctgg
gcggcctggcctgcagcccctcagcctaaagactctatgagcttaggacgaccttctgac
cccttcctcgctgcgttccgcgacccttcacctggacgttccccgctaccgctggagaac
cccgctagcacccccgcgttcacgtttcccgcgttttcccgcagcctggcggctccagaa
ctggaatccagtgtatggagctgtaaacacattccacccgaggacccttttctagctgcg
tttgagcgctcgtcgtcccaggacacccgaaccccccctgaaactgcctgggcccccccg
ccccccaggtcatcacgggacagccgcactgatccgttcacgaaacccttaaacgacacg
aaaagtcttcctcctccttcatcatcatcctcctcacgcaaagacagagagcgaaaaaga
gaccacagcgtccctcccccagactcctcctcctccgacgaccccttcgccatcaccatg
atcggcagccccacccaccagtccgccctggcggccgctcaggtggccacaggacccacc
cggaccacggtggtcagccctaaacccgcccccactcccgcgcagcccaagaaagagctg
gtgcactggagctcgctccacaacccgttcagcgaaggggttccgaccggcggcgtctct
gcaggaactgtacaggaaaccagcaggaaacagagccggagctgcgatgagccgcggagg
aacggacccccgctcaccagacactccggaccccaggaggacctctgcttctccaccgac
aaagaccagaactgcctcgacatcaacacacacactgcctctcagcgtagttttcggcag
gacagttccgagctgctggttctggctcctcctcagccgacccgctccaagcgttcttca
gccaggctgagcggctgtgaacggtccaggtccctgtgctcgtctcctctgcctgagccc
agccctcccccatcctcctcctcctcctccagccccagtgattgggggggccagacccgc
gccccgagtcctgcacgaggtttgtccagagggccgagtccgatctctctcagcactcag
gaggcgtggcctgttgctgcagcgattactgagtacatcaacgcttactttaaaggtgga
gaacataaccgctgtctggtgaagatcactggtgacctcaccatgtcatttcctgctgga
atcacgcggatattcacggccaaccccaacgccccagtgctcagcttccgattggtcaac
atttctcgagtggatcacttcttacccaatcagaagctgctcttcagcgacccctcccag
aacgacccggactccagagacttctggttcaacatgcaggccttgacctttcacctccag
agagaggcggagcttaacccacaggcgtcctactacaacgtgggcttgctgaagtatcag
gtgtcgtctcaggaccccgcccgcgctcctctgctgctctcggccgagtgccagcgcagc
gggacggtcacccgcgtgtccctcgactaccactgttgcccggcaaccgcccccgccacc
cagctcaccgccgtgcaggtgctgctgcctctggaccacacagccactgacctgcagtgc
caacccccagcatcctggaatgctgaggagaggagactactctggaaactgcccaacctc
tccccgaccaatcacagcaaaggctctggcacgttgtgtgccagttggcagtgcctggag
gttccccgcggtccccctccgagtctggctgtgcagtttgtgggttcgggggcgtctctg
tcgggtatggatgtggagctggtgggcagccggtacagaatgtctttggtgaagaagaga
ttcgccacagggaagtacatggctggatgttcactgtga
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