KEGG   Astyanax mexicanus (Mexican tetra): 103047409
Entry
103047409         CDS       T05042                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03420  Nucleotide excision repair
amex04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103047409 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103047409 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    103047409 (cul4b)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103047409 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103047409 (cul4b)
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     103047409 (cul4b)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103047409 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103047409 (cul4b)
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103047409 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 103047409
NCBI-ProteinID: XP_007254497
Ensembl: ENSAMXG00000000215
LinkDB
Position
10:48753298..48772784
AA seq 863 aa
MFPTGLPSPNPPPPTQESRPPVSDVRSDSGLTSPKKRKLHSAEREDPVEPVPSSPRAACQ
STAAAAAAAASCTANSTQHIQKKLRFEEPLDLLGLDVKMAEDSPTASCSKAKSALLAAGV
AHHANGLTKSAGSATFTNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNS
TSIKYNLEELYQAVENLCSHKISPKLYKQLRAVCEDHIKAQIDQFREDSLDSVLFLKKID
KCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGI
LLLIERERSGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREV
PEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRI
QDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDSII
DVCFMKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKI
MIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFK
DMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKT
FYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKLA
TGIEDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKE
TVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRI
ESLIDRDYMERDKENPNQYNYVA
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctaatcccccgccgccgacccaagagtccagaccg
cccgtttcggatgtccgcagcgacagcggcttaacgtcgcccaagaagagaaagctccac
agcgccgagagggaagaccccgtcgagcccgtgccgtcctcccccagagccgcctgccag
tccaccgcagccgccgccgctgctgcagcgtcgtgcacggccaactcgacgcagcacatc
cagaagaagctgaggttcgaggagccgctggatctcctcgggctggatgtgaagatggcc
gaggactctcccacggcgtcctgctccaaggcgaagagcgcgctgctggccgcgggggtc
gcgcaccacgccaacggcctcacaaagtccgccggctccgcaaccttcaccaacagcaag
ccgggggcggccaagaagctggtgatcaagaactttaaggaaaagccaaaattgccagaa
aattacacacatgagacctggcagaagttgaaggaggcggtcgaggccatacagaacagc
acttcaataaaatacaatctggaggagctctatcaggctgttgagaatctgtgttcccat
aagatttctcccaaactctataaacagctgagagcagtgtgtgaagatcacatcaaggct
caaatcgatcaattcagagaggactccctagacagtgtgcttttcttgaagaagatagat
aaatgttggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttg
gatcgcacatatgttttacaaaattctatgctgccatctatctgggatatgggactggag
ctgtttcgtttctacattatcagtgatttgaaagtgcagagtaagacgattgatgggatc
ctgctgcttatcgagagggagcgcagtggggaggctatagaccgcagtctcctgaggagt
ctactgagcatgctctctgacctgcagatttatcaagactcatttgagcagcgttttctg
gaggagacgaatcgactgtacgctgctgagggtcagaggctcatgcaggagagagaggtg
ccggagtatcttcatcatgtcaacaagcgtttggaggaggaagcagaccgagtcatcaca
tacttggaccagagcacacaaaaacccctcatcgccactgtagaaaaacaactgcttggt
gaacacctgaccgcaacacttcagaaaggcttgaatcacctcctggatgagaatcgtatc
caggatttatctctgctgtatcagctgttcagtcgggttcgaggtggagtgcaggttctg
ctgcagcactggatcgagtacatcaaggccttcggtagcacaatagtcatcaaccctgag
aaagacaagacgatggtgcaggagctgctggacttcaaggataaggtggactccatcatc
gacgtgtgcttcatgaagaacgaaaaattcgtaaacgctatgaaagaagctttcgagacc
tttattaacaagcggccgaacaaacctgcagagctcatagcaaaatatgttgattcaaag
ctcagggcaggaaataaagaagccacagacgaggagctcgagaagatgctggacaagatt
atgatcatattcaggttcatttatggtaaagatgtgttcgaggccttctataagaaagat
ttggcgaagaggttgttagttgggaaaagtgcctctgtagatgcagagaaatcaatgctg
tcaaaactaaaacacgaatgtggagctgcatttacgagtaaattggaaggaatgttcaag
gacatggagctttcaaaagacatcatggtgcaattcaaacagtacatgcagtgccaaaat
atccccggtaacattgagctgacggtgaacatcctcactatgggttactggccaacatac
gtccccatggaagtgcatttgcctccagagatggtgcgactgcaggaaatctttaagact
ttttatctggggaagcacagcggaaggaaacttcagtggcagtcgacgttaggacactgt
gtattgaaagcagaatttaaggagggaaagaaggagcttcaggtgtcgctctttcagacg
ttagttctgctcatgtttaacgaaggagaggaattttccttggaagagattaagctggct
acaggaattgaggatggcgagctgaggcgtacgctgcagtcccttgcctgcggaaaggct
cgagttctcaccaaaatccccaaaagcaaagatgtagaagatggagacaagttctcttgc
aacgatgacttcaaacacaagctcttcaggatcaagatcaaccagatccagatgaaagaa
actgtggaggagcaagctagcactacagagagagtcttccaggaccggcagtatcagatc
gacgccgccatcgtccggatcatgaagatgaggaagaccttgagccataatctgctggtg
tctgaggtctacaaccaactcaagttcccggtcaagcctgctgatttaaagaagaggata
gagtcactcattgatagggactacatggaaagagataaagaaaaccccaatcagtacaac
tatgtggcttag

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