Astyanax mexicanus (Mexican tetra): 103047409
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Entry
103047409 CDS
T05042
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03420
Nucleotide excision repair
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103047409 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
103047409 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103047409 (cul4b)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103047409 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103047409 (cul4b)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
103047409 (cul4b)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103047409 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103047409 (cul4b)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103047409 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
103047409
NCBI-ProteinID:
XP_007254497
Ensembl:
ENSAMXG00000000215
LinkDB
All DBs
Position
10:48753298..48772784
Genome browser
AA seq
863 aa
AA seq
DB search
MFPTGLPSPNPPPPTQESRPPVSDVRSDSGLTSPKKRKLHSAEREDPVEPVPSSPRAACQ
STAAAAAAAASCTANSTQHIQKKLRFEEPLDLLGLDVKMAEDSPTASCSKAKSALLAAGV
AHHANGLTKSAGSATFTNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNS
TSIKYNLEELYQAVENLCSHKISPKLYKQLRAVCEDHIKAQIDQFREDSLDSVLFLKKID
KCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGI
LLLIERERSGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREV
PEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRI
QDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDSII
DVCFMKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKI
MIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFK
DMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKT
FYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKLA
TGIEDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKE
TVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRI
ESLIDRDYMERDKENPNQYNYVA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccgccgccgacccaagagtccagaccg
cccgtttcggatgtccgcagcgacagcggcttaacgtcgcccaagaagagaaagctccac
agcgccgagagggaagaccccgtcgagcccgtgccgtcctcccccagagccgcctgccag
tccaccgcagccgccgccgctgctgcagcgtcgtgcacggccaactcgacgcagcacatc
cagaagaagctgaggttcgaggagccgctggatctcctcgggctggatgtgaagatggcc
gaggactctcccacggcgtcctgctccaaggcgaagagcgcgctgctggccgcgggggtc
gcgcaccacgccaacggcctcacaaagtccgccggctccgcaaccttcaccaacagcaag
ccgggggcggccaagaagctggtgatcaagaactttaaggaaaagccaaaattgccagaa
aattacacacatgagacctggcagaagttgaaggaggcggtcgaggccatacagaacagc
acttcaataaaatacaatctggaggagctctatcaggctgttgagaatctgtgttcccat
aagatttctcccaaactctataaacagctgagagcagtgtgtgaagatcacatcaaggct
caaatcgatcaattcagagaggactccctagacagtgtgcttttcttgaagaagatagat
aaatgttggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttg
gatcgcacatatgttttacaaaattctatgctgccatctatctgggatatgggactggag
ctgtttcgtttctacattatcagtgatttgaaagtgcagagtaagacgattgatgggatc
ctgctgcttatcgagagggagcgcagtggggaggctatagaccgcagtctcctgaggagt
ctactgagcatgctctctgacctgcagatttatcaagactcatttgagcagcgttttctg
gaggagacgaatcgactgtacgctgctgagggtcagaggctcatgcaggagagagaggtg
ccggagtatcttcatcatgtcaacaagcgtttggaggaggaagcagaccgagtcatcaca
tacttggaccagagcacacaaaaacccctcatcgccactgtagaaaaacaactgcttggt
gaacacctgaccgcaacacttcagaaaggcttgaatcacctcctggatgagaatcgtatc
caggatttatctctgctgtatcagctgttcagtcgggttcgaggtggagtgcaggttctg
ctgcagcactggatcgagtacatcaaggccttcggtagcacaatagtcatcaaccctgag
aaagacaagacgatggtgcaggagctgctggacttcaaggataaggtggactccatcatc
gacgtgtgcttcatgaagaacgaaaaattcgtaaacgctatgaaagaagctttcgagacc
tttattaacaagcggccgaacaaacctgcagagctcatagcaaaatatgttgattcaaag
ctcagggcaggaaataaagaagccacagacgaggagctcgagaagatgctggacaagatt
atgatcatattcaggttcatttatggtaaagatgtgttcgaggccttctataagaaagat
ttggcgaagaggttgttagttgggaaaagtgcctctgtagatgcagagaaatcaatgctg
tcaaaactaaaacacgaatgtggagctgcatttacgagtaaattggaaggaatgttcaag
gacatggagctttcaaaagacatcatggtgcaattcaaacagtacatgcagtgccaaaat
atccccggtaacattgagctgacggtgaacatcctcactatgggttactggccaacatac
gtccccatggaagtgcatttgcctccagagatggtgcgactgcaggaaatctttaagact
ttttatctggggaagcacagcggaaggaaacttcagtggcagtcgacgttaggacactgt
gtattgaaagcagaatttaaggagggaaagaaggagcttcaggtgtcgctctttcagacg
ttagttctgctcatgtttaacgaaggagaggaattttccttggaagagattaagctggct
acaggaattgaggatggcgagctgaggcgtacgctgcagtcccttgcctgcggaaaggct
cgagttctcaccaaaatccccaaaagcaaagatgtagaagatggagacaagttctcttgc
aacgatgacttcaaacacaagctcttcaggatcaagatcaaccagatccagatgaaagaa
actgtggaggagcaagctagcactacagagagagtcttccaggaccggcagtatcagatc
gacgccgccatcgtccggatcatgaagatgaggaagaccttgagccataatctgctggtg
tctgaggtctacaaccaactcaagttcccggtcaagcctgctgatttaaagaagaggata
gagtcactcattgatagggactacatggaaagagataaagaaaaccccaatcagtacaac
tatgtggcttag
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integrated database retrieval system