Astyanax mexicanus (Mexican tetra): 103047498
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Entry
103047498 CDS
T05042
Symbol
arid5a
Name
(RefSeq) AT-rich interactive domain-containing protein 5A isoform X2
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103047498 (arid5a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
ARID
103047498 (arid5a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
103047498
NCBI-ProteinID:
XP_007231541
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Position
12:complement(27455920..27479704)
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AA seq
586 aa
AA seq
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MVSDPCGEMSGAEEQIEVCEETPEESSPNQSNREMVNPEQTNSNAEESLTDQSLSEERAF
VINLYRFMKDRGTPIERIPHLGFKQINLWKIYKAVETLGGYDSVTARRLWKNVYDELGGS
PGSTSAATCTRRHYERLVLPFERHRKGEEDKPLPPSKPRKQYKRSDENKSSKAEGKKRRR
TVERDELEETLRADHHCERGLCPHPSSWPMSSEHPESDRLAQGMLPDTCPREKPLLQPLS
PALVISPLEKKKRLAQASLNLPAALEEGSEPERPSVIQLSHSSSSQSPARVRHASDGSPL
PLSSPSASPSRSSSPYSVSSEEGVAGPPRRQTPAPEVEKQQKPAQFGCLPNTEAGTMRVC
KPLSRYPLPKELAGIPRQHYQDFMHVSPAHQDKTQRMLPIWATDAKLGLRHSALRNSVSA
SPGPSFWVPSASSFTKVLPRRTGSLQPSYKPHHHHHQPNSKRPSSAEAYMKKTPFTDRKD
KTKMVVPKPVPPQHYLVHSQASLSVPYLVPAFDRPRIEAVEQLKSVQPFLLPTHLAIPPS
QSHPTHPLPVGTTFSGPYEAALRSYPYPLPLWHPPAGFSMASLQPY
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggacccttgtggagagatgagtggggccgaggagcagatagaggtgtgtgag
gagactccagaggagagttcaccaaatcagtccaacagggagatggtgaacccagagcaa
accaacagcaacgcagaagaatccctgactgatcagtcactgagtgaggagcgagccttc
gtgatcaatttgtatcgttttatgaaggaccgaggcacacccattgagagaatccctcac
ctaggctttaaacagatcaacctgtggaaaatctacaaagccgtggagacgctgggaggc
tatgactcggtgacagctcgacggttgtggaagaatgtgtatgatgagctgggtgggagt
ccaggcagcaccagtgcagccacctgcacccgaagacactatgagaggttggttttgcca
ttcgagaggcaccgaaagggtgaggaggataaaccccttccaccttcaaaacctcgtaaa
cagtacaagaggagcgatgaaaacaagagcagcaaagcagagggcaagaagaggaggaga
acagtggagagagatgaactggaggagacgctcagagcagatcaccactgtgagagaggc
ttgtgccctcaccccagttcttggcccatgtcttcagagcatccagaaagtgacagactt
gcccagggtatgctcccagacacctgccctagggagaagcccctgctccagcccctgagc
cccgccctggtcatttcccctctggagaagaagaagcgtcttgcacaggccagcctgaat
ctgcctgcggccttggaggaagggagcgagccagaaagaccctcggtgatccagttatcc
cactcttcttcctcccagtctccggcccgcgtgagacatgcctctgatggctcacccctt
cccctctcctctccatctgcctccccctcccgcagctcttcaccctactctgtgtcctct
gaggagggtgtggctggcccaccccggaggcagacaccagctcctgaagtggaaaagcag
cagaaaccagcgcagtttggttgtctccctaacacagaggctggaactatgcgagtttgc
aagcctctaagccgctaccctttacccaaagaacttgctggaataccccgtcaacattac
caagactttatgcatgtcagtcccgcacatcaggacaaaactcagaggatgttgccaatt
tgggccacagatgccaaattgggattgaggcactcggccctccggaactctgtatctgca
tcccctggaccaagtttctgggtgccctctgcttccagcttcactaaggtccttcctcgg
aggacgggatcactacagccatcctacaaaccacaccaccaccaccaccagcccaattcc
aaaaggcccagcagcgccgaagcctacatgaaaaagacccctttcacggacagaaaggac
aaaaccaagatggtggtgcccaaacccgttccaccccaacattacttggttcactcacag
gcgagtttgtccgtaccttacctagtcccagcttttgacagacccagaatagaagcagtg
gaacaacttaaatccgtccagcccttcctcctccccactcatctcgccatccctccgtcc
caaagtcatcccacacatcctttaccagtgggaaccaccttttctggaccttacgaagca
gccttgcgctcatatccttatccactgccactgtggcacccacctgctggctttagcatg
gcaagcctgcagccatattaa
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