Astyanax mexicanus (Mexican tetra): 103047552
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Entry
103047552 CDS
T05042
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103047552 (prdm1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103047552 (prdm1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
103047552
NCBI-ProteinID:
XP_022534812
Ensembl:
ENSAMXG00000004952
UniProt:
W5KBW7
LinkDB
All DBs
Position
4
Genome browser
AA seq
755 aa
AA seq
DB search
MCGWNQSLSAASQHSSVMLTTEEAPHTADQVDAKMNVEDADMSKWTEAEFEEKCTYIVKD
HTWENPQDKPELTRAQASLPRNLAFRHSSDSKEVIGVVSREYIPKGTRFGPLVGEKYTAE
NVPKDANRKYFWRIYTEGEFHHFVDGLDEERSNWMRYVNPAHSQEEQNLAACQNGMNIYF
YTVKAIPADQELLVWYCSDFAQRLHYPLSGDLMMQKLKQSLVEAKQQASEEMPVVKREYT
VSEILKDTWKVPARPLPTRPHCQYSPDRPIYPRVIYPIRPQPHHIREEFLKASTAICFAT
RSPGQSSSTPSPPARSSPESSPQSSPAPRDPRDLPALPYSASLGHYPGFSPPTPISSFYP
NPHYILSHYSMNGAPPVGSVFPRMYPFINGLLPPHMPHPSAMLPPEGGRNLLLPPPYRDL
LIPPPKSAFPQATTPKDKPLHGHGHPHVPASGSPTAGCAASPDQQPANPTSAQPSAGRLE
DEEIRLSKMKRGPAGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCPHCHRNYIHLCSLRLHLKGYCLAAMPSPCCSLDE
LNRINEEIERFDISDHADRLEEIEGVDVERLVEKQILSLLFSREMDLKSSYHKGSDLLGP
HLSSSYGLYEPSSETSVIKLLPVKVKQETVEAMEP
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctggaaccaaagtctgtcggccgcctctcagcatagctctgtcatgttgacc
actgaggaggctccccacaccgctgaccaggtggacgcaaagatgaacgtagaggacgcc
gacatgtccaagtggacggaggccgagtttgaagagaaatgcacctacatagtgaaggac
cacacgtgggaaaacccacaagacaagccagagcttacaagggcccaggcttcactcccc
cggaacctggccttcagacactcatcagactccaaagaggtaatcggtgtagtgagccga
gagtacatccccaaaggcactcgcttcggccctctagtgggagagaagtacaccgcagag
aatgtccccaaagatgccaacaggaagtacttctggaggatttacacagaaggcgagttc
catcactttgtggatggcctggacgaggagaggagcaactggatgcgctatgtgaaccca
gcccattcacaggaggagcagaacctggcagcctgccagaacggcatgaacatctacttc
tacacagtgaaggcgattccagctgaccaagagctgctggtgtggtactgctccgacttc
gcccagcgactgcactaccctctttcgggagatctcatgatgcaaaagctcaaacaaagt
ctggtggaagcgaagcagcaagcatctgaagaaatgccagtggtgaagagagaatacact
gtttcagagatcctgaaagacacatggaaggtacctgctaggcccctgcccacacggcct
cactgtcaatacagccctgaccgacccatctacccccgtgtcatctatcccattcgtcca
caacctcatcacatcagagaagaattcttgaaggcaagcacagctatctgctttgccact
cgctcacctggacaatcctcatccacccccagcccaccagcacgcagcagcccagagtcc
agtccccagagcagtcctgcaccacgggatcctagagacttacctgccctcccctacagt
gctagcttgggccactacccaggcttctcccctcctactcctatctcctccttctacccc
aatccacattacattctgagccactactctatgaatggggctcctccagtggggagtgtg
ttcccccgcatgtaccctttcatcaatggcctactgcctcctcacatgccccacccttca
gccatgcttcctcctgagggaggccggaatttgcttttgccgccaccatacagggacctg
ttgatcccaccccccaagagtgccttccctcaagcaacaaccccgaaggacaaacccctg
catgggcatggacaccctcatgtccctgctagtggatcccccacggctggctgtgcagcc
tcccctgaccagcagcctgccaaccctacctcagcccaaccaagcgctggacgtctggag
gatgaggaaatccgtctcagcaagatgaagcgaggcccagcaggctacaagaccctgcca
taccctctgaaaaagcagaatggcaaaatcaagtacgagtgcaatgtatgcagcaagacc
tttggacaactttccaacctcaaggtgcacctgcgtgtccacagtggtgaacgtcctttc
aagtgtcagacatgcaataaaggctttacccagctggcccacctgcagaagcattacctg
gtccacacaggagagaagccccatgagtgccaggtgtgtcacaagcgtttcagtagcaca
agtaacttgaagacccacctgcgactacactcaggtgaaaagccctaccagtgcaagctt
tgcccagcaaagttcacacagtttgttcacctcaagctgcacaaacggctgcatacacga
gagcgcccccacaagtgcccgcactgtcaccgcaactacatccacctctgcagccttcgc
cttcaccttaagggatactgcctggctgccatgccatctccctgctgcagcctagatgag
ctcaatcgcattaatgaggagattgagcgcttcgacatcagtgaccacgctgaccgattg
gaggagatcgaaggcgtagatgtggagaggctggtggagaagcagatccttagtctgctc
ttcagccgggaaatggacctcaagtcatcgtaccacaaaggcagtgatcttcttggccca
catctttccagttcctacggcctgtacgagccaagcagcgagacatcggtcattaaactc
ctgcccgtcaaggtgaaacaagagactgtggaggcgatggagccttag
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integrated database retrieval system
