KEGG   Astyanax mexicanus (Mexican tetra): 103047600
Entry
103047600         CDS       T05042                                 
Name
(RefSeq) ras-related protein Rab-11B
  KO
K07905  Ras-related protein Rab-11B
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103047600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103047600
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103047600
   04031 GTP-binding proteins [BR:amex04031]
    103047600
Membrane trafficking [BR:amex04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    103047600
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103047600
  Exosomal proteins of other body fluids (saliva and urine)
   103047600
  Exosomal proteins of colorectal cancer cells
   103047600
GTP-binding proteins [BR:amex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    103047600
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 AAA_16 PduV-EutP ABC_tran AAA_14 Gtr1_RagA NTPase_1 TniB FeoB_N AAA_24 FAD-SLDH AAA_21 AAA_5
Other DBs
NCBI-GeneID: 103047600
NCBI-ProteinID: XP_007252710
Ensembl: ENSAMXG00000016024
UniProt: A0A8B9RCL4 A0A3B1IST0
LinkDB
Position
5:12398273..12405148
AA seq 218 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNSLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
IADRSAHDESPGNNVVDISVPPTTDGLKGSKFQCCQNL
NT seq 657 nt   +upstreamnt  +downstreamnt
atggggacccgagatgacgaatatgattacttatttaaagtggtgctcatcggggactcc
ggtgtggggaagagtaacctgctgtcccgtttcacacggaatgagttcaacctggagagc
aagagcaccatcggtgtggagtttgccactcgcagcatccaagtggacggaaagaccata
aaagctcagatttgggacacagcaggacaggagcgatacagagcaatcacatcagcgtat
taccgaggtgcagtgggagctcttttggtgtatgacatcgctaagcatctgacttacgag
aatgtggaacgctggctgaaggagctgcgagaccatgcagacaacaacattgtcattatg
ttagtgggcaacaagagtgacctgaggcatcttagagcagtgcctactgatgaggcaaga
gcttttgcagagaagaacagtctgtccttcattgagacatcagctttggactccacgaac
gttgaagaggctttcaaaaatatactcacagaaatctaccggatcgtatcacaaaagcag
attgcagaccggtctgcacacgacgagtctccaggcaacaatgtggtggacatcagtgtg
ccaccgactaccgatgggctaaaaggctccaaattccagtgctgccagaatctgtga

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