Astyanax mexicanus (Mexican tetra): 103047704
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Entry
103047704 CDS
T05042
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103047704 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103047704 (smarcd3b)
03036 Chromosome and associated proteins [BR:
amex03036
]
103047704 (smarcd3b)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103047704 (smarcd3b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103047704 (smarcd3b)
PBAF complex
103047704 (smarcd3b)
GBAF(ncBAF) complex
103047704 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103047704
NCBI-ProteinID:
XP_007230378
Ensembl:
ENSAMXG00000006986
UniProt:
A0A8B9LNP2
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All DBs
Position
8:33660982..33744735
Genome browser
AA seq
513 aa
AA seq
DB search
MASEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGNPAVRPAL
TNPTMEANRKRPAPSQQQMQQQAVQNRNRKKPVGFPGASEMQGRQMDMREAQSDPTLGSN
TKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKADADDSDGSIASWELRVEGKLLDDPAKVKRKFSSFFKSLVIELDKDLY
GPDNHLVELLSSKAQWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLA
RLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLT
NLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSNFLLSTANQQEIASLDN
KIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFY
HQPWSQEAVSRYFYCKIQQRRQELEQALAIRNT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggagacggccggaggggcgcggaaagccaccaagagcaaactgttcgag
ttcctcgtccatggagtgcgtcccggcatgccatcaggtgcgagaatgcctcatcagggg
gcgccgatgggaccgccagggccgccatacggaggaaaccccgccgtccgtcccgcgctg
accaaccccaccatggaggcgaaccgcaaacggccggcgccctcgcagcaacagatgcag
cagcaggccgtccagaacagaaacaggaagaagcctgtgggatttcccggagccagtgag
atgcaaggaaggcagatggacatgagagaggcccaatcagatcccacgcttggatcaaac
accaagaggaggaaaatggctgataagattcttccacaaaggatccgtgagctggtccct
gagtctcaggcttatatggacctgctggcattcgagcgcaaactggaccaaaccataatg
cgcaagcgtgtggacatccaagaggcactgaagagacccatgaagcaaaaacgcaaactg
cgactctacatctctaataccttcaacccggccaaggctgatgctgatgactctgacggc
agcattgcatcctgggagcttcgggtggagggaaagttactggacgatccagccaaggtg
aaaaggaaattttcctcgttttttaaaagcctggtcattgagctggacaaagacctgtac
ggaccagacaaccacctagtggagctgctgagcagcaaggctcagtggcatcgcactccc
accactcaggagactgacggcttccaggtgaagaggccaggtgatgttaatgtacgctgc
acactgctcttaatgctggactaccagccccctcagttcaagctggaccctcggcttgct
cgcctgctgggtattcacactcagacccgctcctgcatcatccaggccctctggcagtac
atcaaaaccaacaagctgcaggactcccacgacaaggagtacatcaactgtgacaagtat
ttccagcagatttttgactgtcctcggctaaagttctctgagatccctcagcgcctcacc
aacctgctgctgccccccgaccccatcgtcatcaaccacatcattagtgtggaccctaac
gatcagaagaaaacagcctgctacgatatagacgttgaagtggaggatccgctcaaagcc
cagatgagcaacttcctgctctccacagccaatcagcaggagattgcgtcacttgacaat
aagatccatgagaccattgagtccatcaaccagctgaagattcagagagacttcatgctc
agcttctccagggatcctaaaggctacattcaggactggctgaaatctcagagcagagac
ctcaaactgatgacggatgttgttgggaacccagaggaggagaggagggcggagttttac
catcagccctggtctcaggaggccgtcagccgctacttctactgcaagattcagcagaga
agacaggagctggagcaagccctggctataaggaacacttag
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