Astyanax mexicanus (Mexican tetra): 103047724
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Entry
103047724 CDS
T05042
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103047724 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
103047724
NCBI-ProteinID:
XP_022541400
Ensembl:
ENSAMXG00000002573
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Position
12:complement(41627568..41655553)
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AA seq
816 aa
AA seq
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MQRLRHFISVVLLPIAALSLDFNQFSGGPSRNARSLYEKTPLSERIIKQAEHSIHKRSAD
SGEDTCNSLQRYDTKLTSNTHSHSFDDLSGSVSLAWIGDGTGVLLALTTFQVPLFMLRFG
QSRLYRSEDYGKTFQDVTELISNTFISTDFGIAIGPESSGKVILTGDLSGSGSARIFLSS
DFGNSFTRSDLPFNPKMQIMYNPQNPNVLVAISTKSDLWISENFGEKWRIISETVCVVKW
GADNTLFFSTNLNGSCSDRGMLTLKKTIDNGQTINTIAEKIYSFGIGGRFLFASVMTGTG
TLRMIHVSVDQGKEWNMAQLPPVGHEQFYSILAANNEMVFMHVDEPGDTGFGTIYVSDDR
GMVYSKSLEHHLYTATGGDNDFTNVTSLRGVFMTSVLAEDGSLQTVVSFDQGGEWVPLRK
PENSECDSTAKDKDKCSLHIHASYSISKKLNVPMLPLSEPNAVGLIIAHGSVGDAISVLT
PDVYVSDDGGYSWLRALEGPHHYAILDSGGLLVAVEHNPTVPISQIKFSTDEGQCWHVYN
FTKEPLFFTGLASEPGARSMNVSIWGYRETLITQYWVSITIDFRELLTRDCVENDYVPWL
AHSDDISDPKDGCMLGYKEKFLRLKKDSVCWNGRDYNVNKQPTPCACTLDDFLCDFGYYR
NENSSDCLEQPELKGHDLELCIHGKKEHLQTNGYRKIPGDKCEGGNQPERKEVDIRKKCI
SNLLDPQKQTQNNGKPSHSAPIIVTVIAIVLVSCIAGALFVKKYVCGGRFLVHRYSVLQH
NAEANGIEGMDETLDTNVAGHAKIGFHDDSDEDLLE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctacgccactttatttcagttgtgctgctccccatcgcagctttgagttta
gattttaatcagttcagcggtggtccgtcccgtaacgcccgctctctctacgagaagacc
cccttatcagagaggattataaagcaggcagagcacagcattcacaaacgaagcgcagac
tctggagaagacacctgtaattctctgcagagatatgacaccaaattaaccagcaacact
cacagccacagctttgatgatcttagtggatcagtgtctctggcctggataggagacgga
acaggggttcttctggctctgaccacatttcaggtgcctttattcatgctaagatttggc
cagtcccggctgtataggagcgaggactatggtaagacctttcaggatgtcacagagctc
atcagtaacacctttatcagcactgactttggaatcgccattggccctgagagctctggg
aaggtgatccttacaggagatctgtctggaagtggtagtgccagaattttcctctcatca
gattttgggaacagcttcactcgctcagacctgccatttaatccaaaaatgcagatcatg
tacaatccccaaaaccccaacgtacttgtggcaatcagcaccaagagtgacctctggatt
tcagaaaactttggagagaagtggaggatcatcagcgagactgtgtgtgtggtcaaatgg
ggggcagacaatacactcttcttctccacaaacctgaatgggtcctgctctgacagaggg
atgctgactttgaagaagactatagacaatggacaaacaattaacacaatcgcagagaag
atttactcctttgggattggtgggcgtttcttgttcgcctctgtcatgactggaacaggt
acgttgcgaatgatccatgtgtctgtggatcagggtaaggagtggaacatggcacagctc
cctcctgtaggacatgagcagttctactcaatactagcagccaacaatgagatggtgttc
atgcacgtggatgaaccaggagataccggctttggcaccatttatgtgtcggatgaccgg
ggcatggtttactccaagtctctggagcaccatctctacacggccactgggggtgataat
gatttcaccaatgtgacatcactcagaggtgtattcatgaccagtgtgctagctgaagat
ggctctttgcaaactgtggtgtcgttcgaccagggaggggaatgggtgcccttgaggaaa
ccagaaaacagcgagtgtgattccacagctaaagataaagacaaatgtagtctacatatc
cacgcatcttacagtatctctaagaagttgaatgtgccaatgcttcctctgagtgagccc
aatgctgtgggactgataatcgctcatggtagcgtgggtgatgcaatctcagtgctgact
ccagacgtgtacgtgtccgatgatggtggatactcgtggctgcgtgctctggagggcccc
caccactacgccatcctggattccggaggtctgctggtcgctgtggagcacaaccccaca
gttcccatatctcagatcaagttttccacagatgagggccagtgctggcatgtgtacaac
ttcaccaaagaaccgctcttcttcaccgggcttgcctcggagccaggggcacgttccatg
aatgtcagtatctggggctacagagaaactctgatcactcagtactgggtctccatcacc
atcgacttcagagagctgcttactcgcgactgtgtggagaatgactatgtgccgtggctg
gcacattctgatgacatcagtgaccctaaagatggctgcatgcttggttataaggagaag
tttctgcgtctgaagaaggactcagtgtgctggaatgggagagattacaatgtcaataag
cagcctacaccatgcgcctgcactctggatgacttcctgtgtgactttggatactaccga
aatgagaacagctctgattgtctagagcagcccgagctcaaaggccatgatctagagctg
tgcattcatgggaagaaagaacatctgcagaccaatgggtatcgtaagattcccggggat
aagtgcgagggaggcaatcaaccagaaagaaaagaggttgatattagaaaaaaatgtatc
agcaatctactggacccacagaagcagacacagaacaatgggaaaccttcgcactccgcc
cctattattgtcacagttattgccattgttctcgtcagctgtattgctggagctcttttt
gtgaagaagtatgtgtgtggaggaagattcctggtgcacaggtactcagtcctacagcac
aatgccgaggctaatggcatagagggaatggacgaaactctggatacaaacgtggctgga
catgctaagattggcttccatgatgattcagatgaggacctcctggaataa
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