Astyanax mexicanus (Mexican tetra): 103047818
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Entry
103047818 CDS
T05042
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
amex04148
Efferocytosis
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
amex04810
Regulation of actin cytoskeleton
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103047818 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103047818 (itgb5)
04148 Efferocytosis
103047818 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103047818 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103047818 (itgb5)
04810 Regulation of actin cytoskeleton
103047818 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103047818 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103047818 (itgb5)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
103047818 (itgb5)
Cell adhesion molecules [BR:
amex04515
]
Integrins
Integrin beta subunits
103047818 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
103047818
NCBI-ProteinID:
XP_007253538
Ensembl:
ENSAMXG00000010900
UniProt:
A0A8B9KYS9
LinkDB
All DBs
Position
11:29198173..29264735
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AA seq
804 aa
AA seq
DB search
MWNLWVCVQRAVLFTYIILHCFSHSVRGLNVCMSGSATSCEECLLIHPSCAWCDQEEFGR
ARTLTSRCDFSQNLLKRGCEPHFIENPRSVSSTLKNRPLSSKSSGSTQYGVTQIQPQKIS
VSLRPGDQTSFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMKKLTSNF
RLGFGTFVDKNMSPFSYTAPSYQENPCNGYKPFPNCVPSFGFRNLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGKLAGLVQP
HDGQCHLNDKNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNFTALIPGT
TVEILDQSSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDGQSLPGLRKCAD
LKIGDTVSFNISVDARGCPPPGTQKSFSIKPVGFKDRLEVSVDYLCGCSCTRYTQNNSSR
CSSSGTYTCGTCRCEPGYRGAHCECEEGDTSSLNLGACREAEGKQVCSGRGECSCNQCWC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGDCHCGECKCHAGYIGDNCNCSTETAPCV
SEDGRMCSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACATKRECIECRLFNTGKYADN
QTCQRMCKDQIMSVDTLHTDDPSAVLCLYKTENDCVMKFTYSEHASGQSVLKALQKPECA
SAPDALTVVMAVVGSILLVGIVLLAIWKLVITIHDRREFARFQSARSRARYEMASNPLYK
QPISTHPVETVFHMHSKSYNGGVH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacctgtgggtctgtgttcagcgagcagtgctctttacctacattatactccac
tgcttctcacacagcgtccgaggtcttaatgtttgcatgagtggaagtgccacatcgtgt
gaggaatgtctcctcatccacccgagctgcgcctggtgcgaccaggaggaatttggaaga
gcaaggactctcacttcacgctgtgattttagtcagaatttgctaaaaaggggttgtgag
cctcacttcatagaaaatccacgaagtgtcagttccaccctgaagaacagaccgttgagc
tccaaaagctctggatctacccagtatggtgtcacacagatacaaccacagaagatctct
gtcagcctgagacctggtgatcagacctcgtttgaggtgcaggtgcgtccagttgaagac
taccccgttgatctgtactatttgatggacctgtcgctgtccatgaaggatgacctggat
actattcgaaacctgggaactaaactggctgaagagatgaagaagctaaccagtaatttc
cgtctcggcttcggcacgttcgtggataagaacatgtcacctttctcctacacggctccc
agttaccaagagaatccctgcaacgggtacaagcctttcccaaactgtgtcccctctttt
gggttccgtaacctcttgtctctgactgacaaagtcgaccgcttcaatgaggaggtgcaa
aagcagatggtgtcacgcaacagggatgcaccggagggcggattcgatgctattctacaa
gctgctgtttgcaaggagaaaattggctggaggaaagaggcgtatcacctgctggtattt
gccacagatgatgtgccacacctggctttggatggcaaacttgctggacttgttcagcct
catgatggccagtgccacctgaatgacaagaatgagtacagtgcttcaaccaagatggac
tacccttcactggccctcctcggagagaagctggctgaaaacaacattttcctgatcttt
gcagtgaccaaacggcactatgttctttacaagaacttcactgcactgattccaggaact
acagtggagattttggatcagagctccaaaaatataatccagctgattgtcaatgcctac
aataacatccggtctaaagtggagctgagtgtgtgggatcatcctgaggacctgagtctt
gcctttactgctacctgtcaagatggtcagtccctcccaggcctccgcaagtgtgctgac
ctaaagattggagacacagtctccttcaacatcagtgtggatgctcgtggctgtcctcct
ccaggtacacagaagagtttctccatcaagccagttggttttaaagaccgtctggaggtg
tctgtggactatctgtgcggctgtagctgcacacgctacactcagaacaacagcagccgc
tgcagctccagtggcacctacacgtgtggaacctgccgctgtgagccggggtaccgcgga
gcgcactgtgagtgtgaggagggcgatactagcagcctgaacctcggtgcctgcagagag
gcagaaggcaagcaggtgtgcagtggacgtggcgagtgcagctgtaatcagtgctggtgt
tatgagtcggagtttggcaagatctacggcaccttctgtgaatgcgatgatttctcctgt
gcccgacacaaggggattttgtgctcaggtcatggtgattgccactgtggggagtgtaaa
tgtcatgctggctacattggagacaactgcaactgctccactgagacggccccgtgtgtg
tctgaggatggccggatgtgcagcggccggggcagctgtgtgtgtggtcgctgccagtgc
actgagccaggggcatttggggacacgtgtgaaaaatgccccacctgccctgacgcctgt
gccacaaagagggagtgcattgagtgtcgtctcttcaacactgggaaatatgcagataac
cagacctgtcagcgtatgtgcaaggaccaaataatgtccgtggacacactccacacagat
gaccccagcgctgtgctgtgcctgtataaaacagaaaacgactgtgtgatgaagttcaca
tactctgagcatgcgagcggccagtccgtcctcaaagccttgcagaagccagagtgtgct
tctgcccctgatgccctgacagtggtgatggcagtggtgggcagtattctgttggtgggc
attgtgctgcttgccatctggaagctggtgataaccattcacgatcgacgcgaattcgcc
cgcttccaaagtgcacgctcgcgagcacgatatgagatggcatccaaccctctctataaa
cagcccatctcgactcacccggtggagaccgttttccacatgcacagcaagtcatacaac
ggaggagtccactga
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integrated database retrieval system