KEGG   Astyanax mexicanus (Mexican tetra): 103047818
Entry
103047818         CDS       T05042                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04145  Phagosome
amex04148  Efferocytosis
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04810  Regulation of actin cytoskeleton
amex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103047818 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103047818 (itgb5)
   04148 Efferocytosis
    103047818 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103047818 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103047818 (itgb5)
   04810 Regulation of actin cytoskeleton
    103047818 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103047818 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amex04515]
    103047818 (itgb5)
Membrane trafficking [BR:amex04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    103047818 (itgb5)
Cell adhesion molecules [BR:amex04515]
 Integrins
  Integrin beta subunits
   103047818 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E EGF_TEN
Other DBs
NCBI-GeneID: 103047818
NCBI-ProteinID: XP_007253538
Ensembl: ENSAMXG00000010900
UniProt: A0A8B9KYS9
LinkDB
Position
11:29198173..29264735
AA seq 804 aa
MWNLWVCVQRAVLFTYIILHCFSHSVRGLNVCMSGSATSCEECLLIHPSCAWCDQEEFGR
ARTLTSRCDFSQNLLKRGCEPHFIENPRSVSSTLKNRPLSSKSSGSTQYGVTQIQPQKIS
VSLRPGDQTSFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMKKLTSNF
RLGFGTFVDKNMSPFSYTAPSYQENPCNGYKPFPNCVPSFGFRNLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGKLAGLVQP
HDGQCHLNDKNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNFTALIPGT
TVEILDQSSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDGQSLPGLRKCAD
LKIGDTVSFNISVDARGCPPPGTQKSFSIKPVGFKDRLEVSVDYLCGCSCTRYTQNNSSR
CSSSGTYTCGTCRCEPGYRGAHCECEEGDTSSLNLGACREAEGKQVCSGRGECSCNQCWC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGDCHCGECKCHAGYIGDNCNCSTETAPCV
SEDGRMCSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACATKRECIECRLFNTGKYADN
QTCQRMCKDQIMSVDTLHTDDPSAVLCLYKTENDCVMKFTYSEHASGQSVLKALQKPECA
SAPDALTVVMAVVGSILLVGIVLLAIWKLVITIHDRREFARFQSARSRARYEMASNPLYK
QPISTHPVETVFHMHSKSYNGGVH
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtggaacctgtgggtctgtgttcagcgagcagtgctctttacctacattatactccac
tgcttctcacacagcgtccgaggtcttaatgtttgcatgagtggaagtgccacatcgtgt
gaggaatgtctcctcatccacccgagctgcgcctggtgcgaccaggaggaatttggaaga
gcaaggactctcacttcacgctgtgattttagtcagaatttgctaaaaaggggttgtgag
cctcacttcatagaaaatccacgaagtgtcagttccaccctgaagaacagaccgttgagc
tccaaaagctctggatctacccagtatggtgtcacacagatacaaccacagaagatctct
gtcagcctgagacctggtgatcagacctcgtttgaggtgcaggtgcgtccagttgaagac
taccccgttgatctgtactatttgatggacctgtcgctgtccatgaaggatgacctggat
actattcgaaacctgggaactaaactggctgaagagatgaagaagctaaccagtaatttc
cgtctcggcttcggcacgttcgtggataagaacatgtcacctttctcctacacggctccc
agttaccaagagaatccctgcaacgggtacaagcctttcccaaactgtgtcccctctttt
gggttccgtaacctcttgtctctgactgacaaagtcgaccgcttcaatgaggaggtgcaa
aagcagatggtgtcacgcaacagggatgcaccggagggcggattcgatgctattctacaa
gctgctgtttgcaaggagaaaattggctggaggaaagaggcgtatcacctgctggtattt
gccacagatgatgtgccacacctggctttggatggcaaacttgctggacttgttcagcct
catgatggccagtgccacctgaatgacaagaatgagtacagtgcttcaaccaagatggac
tacccttcactggccctcctcggagagaagctggctgaaaacaacattttcctgatcttt
gcagtgaccaaacggcactatgttctttacaagaacttcactgcactgattccaggaact
acagtggagattttggatcagagctccaaaaatataatccagctgattgtcaatgcctac
aataacatccggtctaaagtggagctgagtgtgtgggatcatcctgaggacctgagtctt
gcctttactgctacctgtcaagatggtcagtccctcccaggcctccgcaagtgtgctgac
ctaaagattggagacacagtctccttcaacatcagtgtggatgctcgtggctgtcctcct
ccaggtacacagaagagtttctccatcaagccagttggttttaaagaccgtctggaggtg
tctgtggactatctgtgcggctgtagctgcacacgctacactcagaacaacagcagccgc
tgcagctccagtggcacctacacgtgtggaacctgccgctgtgagccggggtaccgcgga
gcgcactgtgagtgtgaggagggcgatactagcagcctgaacctcggtgcctgcagagag
gcagaaggcaagcaggtgtgcagtggacgtggcgagtgcagctgtaatcagtgctggtgt
tatgagtcggagtttggcaagatctacggcaccttctgtgaatgcgatgatttctcctgt
gcccgacacaaggggattttgtgctcaggtcatggtgattgccactgtggggagtgtaaa
tgtcatgctggctacattggagacaactgcaactgctccactgagacggccccgtgtgtg
tctgaggatggccggatgtgcagcggccggggcagctgtgtgtgtggtcgctgccagtgc
actgagccaggggcatttggggacacgtgtgaaaaatgccccacctgccctgacgcctgt
gccacaaagagggagtgcattgagtgtcgtctcttcaacactgggaaatatgcagataac
cagacctgtcagcgtatgtgcaaggaccaaataatgtccgtggacacactccacacagat
gaccccagcgctgtgctgtgcctgtataaaacagaaaacgactgtgtgatgaagttcaca
tactctgagcatgcgagcggccagtccgtcctcaaagccttgcagaagccagagtgtgct
tctgcccctgatgccctgacagtggtgatggcagtggtgggcagtattctgttggtgggc
attgtgctgcttgccatctggaagctggtgataaccattcacgatcgacgcgaattcgcc
cgcttccaaagtgcacgctcgcgagcacgatatgagatggcatccaaccctctctataaa
cagcccatctcgactcacccggtggagaccgttttccacatgcacagcaagtcatacaac
ggaggagtccactga

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