Astyanax mexicanus (Mexican tetra): 103047884
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Entry
103047884 CDS
T05042
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X4
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103047884 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103047884 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103047884 (pdlim7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
103047884
NCBI-ProteinID:
XP_022532004
Ensembl:
ENSAMXG00000003081
LinkDB
All DBs
Position
19:2419506..2812074
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AA seq
451 aa
AA seq
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MSGDTKEAMNIYCVTLAGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDWVVS
ISETNAEEMTHVEAQNKIRAATDSLTLTLSRAFQPGGGEQKQPEIMDNRGEVYFDEFYPE
KHSLRVEPPCFIPNDRSKKRLIEDTQDWQPRTGTTQSRSFRILAQLTGTDFMQDPDDETM
KRSSHGVTPCPPTTKPAPKPEPARAPAKPANSTGPSCRPPWVTDPNFAERYHPDKTSTVV
TQHSQPAQPTPMQNRSSILQAAQQNPAESTGRTPLCGACNKIIRGRYVVALGRSWHPEEF
TCCQCRVMLDEGGFFEEKGSVYCTKCYDNRYAPNCDKCKKKITGEIMHALKMTYHVQCFL
CAACKTPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCF
VCALCHINLEGKTFYSKKDKPLCKGHAFSPL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagacaccaaggaggccatgaacatttactgcgtgacgctcgccggcccggcg
ccctggggcttccggctccagggagggaaggacttcagcatgcctctgaccgtatccagg
ctgactcctggaggaaaggccgctcaggccggagtgggcgtgggggactgggtcgtgtcc
atctcagagaccaacgctgaggagatgactcacgtggaggcgcagaacaagatcagagca
gcaaccgactccctcactctgacactcagcagagctttccagcctggtggaggtgaacag
aagcagccggagattatggacaatagaggcgaggtctactttgacgagttttaccctgag
aagcacagtctgcgggtggagcccccctgcttcatccccaacgaccgcagtaagaagcgt
ctgatcgaggacacgcaggactggcaacctcgcaccggcaccacacagtcccgctccttc
cgcatcctcgcccagctcacaggaaccgatttcatgcaggacccggatgatgagaccatg
aagaggtccagccacggagtcacgccctgcccccccaccaccaaaccagcacccaaaccc
gaaccggccagagctccagccaaacctgctaactccaccggtccatcctgtcggcccccg
tgggtaacagacccgaacttcgccgagcggtaccacccggacaagaccagcacggtggtg
acccagcacagccagccggcccagcccacgcccatgcagaaccgcagctccatcctgcag
gcggcgcagcagaacccggccgagagcaccggccgcaccccgctctgcggagcctgcaac
aagatcatcagggggcgctacgtggtggcgctgggccgctcctggcacccggaggagttt
acgtgctgccagtgtcgggtgatgctggacgagggggggttcttcgaggagaagggctct
gtttactgcaccaagtgctacgacaatcgctacgcccccaactgcgacaaatgcaagaag
aagataaccggagagatcatgcacgccctgaagatgacctaccacgtccagtgcttcctg
tgcgccgcctgcaaaacgcccatcaggaaccaggccttctacatggaggagggcgagcct
tactgcgagagagactatgaaaagatgtttggcaccaaatgccacggctgcgacttcaag
atcgatgcgggcgaccgctttctggaggccctgggctacagctggcacgacacgtgcttc
gtctgcgctctttgccatatcaatctggaggggaagacgttctattcgaagaaggataag
cctctgtgtaaaggtcacgccttctctcctctctga
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