Astyanax mexicanus (Mexican tetra): 107196854
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Entry
107196854 CDS
T05042
Name
(RefSeq) gastrula zinc finger protein XlCGF49.1
KO
K09191
general transcription factor IIIA
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
107196854
03021 Transcription machinery [BR:
amex03021
]
107196854
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107196854
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
107196854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-met
Zn_ribbon_8
zf_UBZ
zf-C2H2_DHX34
zf-C2H2_15
Zn_ribbon_SprT
zf-C2H2_ZN142
Phage_zn_bind_3
Zn_ribbon_9
zf-C2HE
zf-LYAR
Siva
Cas12f1-like_TNB
zf-C2H2_11
C2H2-zf_KIN17
LIM
C2CH-4th_BIRD-IDD
zf-C2HC_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
107196854
NCBI-ProteinID:
XP_015463667
LinkDB
All DBs
Position
5:57342865..57346035
Genome browser
AA seq
259 aa
AA seq
DB search
MASIEISSTQPTSSSSPHREIQNNIEKKKTHQCSECGKSFRKLSHLKTHQPIHTGEKPYQ
CSDCGRSFNRQSSLKAHQRIHTGVKPYQCSECGNSFNRLSNLQQHQLIHTGIKPYHCSDC
GKSFTHHNTLKTHQRIHTGIKPYLCSDCGKSFNQQSAFRQHQRIHRGEKPFLCSECGKSF
NRQSALQQHHRLHTGEKPYFCSECGRSFIQQCHLREHQRIHTGEKPYYCSECEKSFRLLN
TFKTHKCIKSSHENMHVNA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatagaaatctccagcactcagccaacatcctcctcttcacctcacagagaa
atacagaacaatatagaaaagaagaaaactcaccaatgctcagagtgtgggaagagcttc
agaaaattgagtcatcttaaaacacaccaacccattcacactggagagaaaccgtatcag
tgctcagactgtgggaggagttttaatcgacagagtagtctaaaagcacaccagcgcatt
cacactggagtgaaaccgtatcagtgctcagagtgtgggaatagttttaatcgcctgagt
aatcttcaacaacaccagctcattcacacaggaataaaaccatatcactgctcagactgc
gggaagagttttactcatcacaatactctcaaaacgcaccagcgcattcacactggaata
aaaccctatctctgttcagactgtgggaagagtttcaatcagcagagcgcattccggcaa
caccagcgcattcacagaggagagaaaccgtttctgtgctcagaatgtgggaagagtttt
aatagacaaagtgctctccaacaacaccatcgacttcacactggagaaaaaccctatttc
tgctcagagtgcgggaggagttttattcaacagtgtcatcttcgagaacaccagcgcatt
cacactggagagaaaccgtattattgctcagagtgtgaaaagagcttcaggcttttaaac
acatttaagacacacaagtgcattaagagtagtcatgaaaatatgcatgtaaacgcataa
DBGET
integrated database retrieval system
