Astyanax mexicanus (Mexican tetra): 107196953
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Entry
107196953 CDS
T05042
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04110
Cell cycle
amex04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107196953
04114 Oocyte meiosis
107196953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
107196953
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107196953
Meiosis-specific proteins
Cohesin complex and associated proteins
107196953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
107196953
NCBI-ProteinID:
XP_022522165
Ensembl:
ENSAMXG00000020424
LinkDB
All DBs
Position
13:complement(49509813..49541298)
Genome browser
AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGKQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAYVSMVYHEDNGEDCTFTRIIIGSSSEYRINSKVVGLSDYSEA
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRANVQLQLFKLYHNECEIEKLNK
ELSQRNKEIDKDRKRMDRVEDELKDKKKELGRMMREQQTVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKADMDELDKEQKAVEMARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIVQSRERDMKELKDRMNVVEDEVFFEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGS
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLRSGTMEDISQEEGSSQEE
SMSSSQKTSSTVLAKEALIEIDYSSLSEDLKDALSDEELKGEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVENFQAIVISLKEEFYTKADSL
VGVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggctatctgaaactaatcgagatcgagaacttcaagtcctacaaggggaaacagatc
atcgggccgttccacaagtttacggctataatcgggccgaatggatcaggcaagtctaat
ctcatggacgccatcagcttcgtcctggcggagaagaccagcaacctgcgtgtgaaaaca
ctgaaggatctgattcatggagctcctgtcggcaaacctgcggccaaccgtgcctacgtc
agcatggtgtaccatgaggacaacggagaggactgtaccttcaccagaatcatcatcggt
tcatcatcagagtatcgcattaacagtaaagtggtgggtctgtctgattacagtgaagct
ctggagaagctgggaattctcatcaaggccaggaacttcctggtgtttcagggagcagtg
gagtccatcgctatgaagaacccgaaggagagaacggctctgtttgaggagatctctcgc
tccggggagctggctcaggagtacgaccgccggaagaaggagatggtgaaggctgaggag
gacacgcagttcaactaccatcgcaagaagaacatcgcagccgagagaaaggaggccaag
caggagaaagaggaggcggagcgttatcagaggctgaaggacgaggtggtgcgggcgaac
gttcagctgcagctctttaaactctatcataacgagtgcgagatcgagaagctgaacaag
gagctcagccagcgcaacaaggagatcgataaagaccgtaaacgcatggaccgcgtggag
gatgagctgaaggacaagaagaaagagctgggcaggatgatgagggaacagcagaccgtg
gagaaggagattaaggagaaagacgctgagctgaatcagaagaggccgcagtacattaaa
gctaaagagaacacggctcataagattaagaagctggaggcggcgaggaagtccctgcag
aacgctcagaaatgctacaagaagcgtaaagcagacatggacgagctggataaggagcag
aaagctgtggagatggccaggcaggagttcgaggagcggatggaggaggaggcgcagagc
cagggccaggacctccagctggaggagaaccaggttaaagcgtatcaccggctgaaggaa
gaggcgagtaagcgagccgccaccctcgcccaggagctggagaaatttaaccgagaccag
aaagctgatcaggaccggctggacctggaggagaggaagaaggtggagacggaggctaaa
atcaagcagaagatcagagagatcgaggagaaccagaaacgtatcgagaagctcgaggat
tacatcaccaccagcaggcagtctctggatgagcagaagagaatggaggaggagcttacg
gaggaagtggagcaagccaagcggaggattgatgaaattaacatggagttgaaccaggtg
atggagcagctcggtgatgctcgtatcgacagacaggagaacagcagacagcagcgcaaa
gctgagatcatggagagcatcaagaggctgtaccctggatcagtgtacggacgtttgata
gatctgtgccagcccactcagaagaagtaccagatcgctgtgactaaagtgctgggtaaa
aacatggacgccatcatcgtggactcggagaagaccggccgtgactgcatccagtacatt
aaagagcagagaggagaacctgagaccttcctgcccctcgactacctcgaggttaagccg
actgatgagaagttgcgagagctgcgtggagctaaactggtgatagatgtgattcgttac
gagccgccgcacataaagaaagccctgcagtacgcctgcgggaacgcgctcgtctgtgac
aacgtggaggacgcccgtagaatcgccttcgggggaccatacagacacaagacggtggct
ctggatggaacactgttccagaagtctggtgtgatctcgggaggagccagtgatctgaag
gctaaagctcggcgttgggacgagaaagctgtggacaagctgaaggacaggaaggagaag
ctcacagatgagctcaaggagcaaatgaaggcgaagaggaaggaggcggagttgcgtcag
gttcagtctcaggctcacggtctgcagatgaggctgaagtattctcagagtgacctcgag
cagaccaagactcgccacctctccctgaacatgcaggaaaaatctaagctggagagtgag
ctggccaactttgggcctcgtataaacgacatcaagaggatcgttcagtcccgtgagcga
gacatgaaggagctgaaagaccgtatgaacgtggtggaggacgaggtgttctttgagttt
tgtaaggagattggtgtgcgaaacatccgtgaattcgaggaggagaaggtcaagaggcag
aatgagatcgccaagaaacgcttggagtttgaaacccagaagacccgccttgccattcag
ctggactatgagaagaaccagctgaaggaggatcaggagaaggtggtgatgtgggagcag
accgtcaagaaggacgagaatgaaatcgaaaaactgaagaaggaggagcagaggcacatg
aagataatagatgagactatggctcagctgcaggacctgaaaaaccagcacctgaccaag
aaatctgaggtcaacgacaagaaccatgagatggaggagatccgcaagaagctcggttct
gccaacaaagagttaacgcagcttcagaaggaggtgaccgctatcgagactaagctggag
cagaagcgcagcgaccgacacaacctgctgcaggcctgcaagatgcaggacatcaaactg
cccctcagatctggaaccatggaggacatcagccaggaggagggaagttctcaggaggaa
tcgatgagcagcagccagaagacgtccagcactgttctggccaaagaggctcttattgag
atcgattacagcagcctatcagaagacctcaaggacgctctgtcggatgaggagttaaag
ggggagatgaacaccctgcagcagaggctgaacgagcagcagagcattctccagaggatc
agcgcccccaacatgaaggccatggagaaactggagagcgtcagggacaagttccaggag
accagcgacgaatttgaggctgcaagaaagagagcgaagaaagctaagcaggcgttcgag
cagataaagaaggagaggtttgatcgcttcaacgcctgtttcgagtccgtcgccaccaac
atcgacgaaatctacaaagccctgtcccgcaacagcagcgcccaggcgtttttgggtccg
gagaacccggaggagccgtatctggacgggattaactataactgcgtggctcctggaaag
cgtttcaggccgatggataacttatctggaggagagaagaccgtggcggctctcgctctg
ctgttcgcaattcacagctataaacctgctcctttcttcgtgctggatgagattgatgct
gccttggacaacaccaacatcggcaaggtggcgaactacattaaggatcagtctgtagag
aacttccaggccatcgtgatctctctgaaggaggagttctacactaaggccgactctctg
gttggagtttatcctgagcaaggagactgtgttatcagtaaggttctgaccttcgacctc
tcccagtatcccgacgccaatcctaatcccaacgagtga
DBGET
integrated database retrieval system
