Astyanax mexicanus (Mexican tetra): 107197303
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Entry
107197303 CDS
T05042
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
107197303 (cdh12a)
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Major cadherins
107197303 (cdh12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
Cadherin_CELSR2_9th
Stevor
Motif
Other DBs
NCBI-GeneID:
107197303
NCBI-ProteinID:
XP_049334476
Ensembl:
ENSAMXG00000036154
LinkDB
All DBs
Position
4:complement(36022826..36155997)
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AA seq
811 aa
AA seq
DB search
MLMGNCLLLFLWCLLDKSFVSPMHSSAQSRSGKEHHRCLRSEQRRHGVSGLHRVKRGWVW
NQFFVLEEYMGTDPQYIGKLHSDLDKGNNLVKYTLSGEGVGSIFTVEPITGDIHALRSLD
REEKPYYTLRAQAVDVLTGRPLEPESEFIIKVQDINDNEPKFLEGPYSASVPEMSPVGTY
VMQVTATDADDPTYGSSARIVYSILHGQPYFSVDPKTGVIKIALPNMDREVKETYQVLIQ
AKDMGGQLGGLAGTTTVNITLNDVNDNPPRFARSIFHLRVPESAPVGSSVGKIKAHDLDL
GKNAEVEYSIVPGDSSSMFDIYTDEQTQEGIVLLKKPLDYENRKAYSFKVVASNPHLDPQ
FLHLGPYKDSATVKISVLDVEEPPVFSRSSYSMETYEDTPTGIVIGAVTAEDLDAGDSPV
RYSIEWKKDAENYFDIDPVEGTITTSEALDREAEAKHNVTVVATKVNNPLLYSRVSVTIS
VLDVNEFPPELSHPYEAFVCEDAKVGQVVEILSATDRDMPHVGHRFFFKSPRDVRNRNFT
IRDYGNNTAGVVTRRAGFQRREKSVYLVPVVVEDSGYPIQSSTGTLSVRVCACDGEGSVL
SCSAEAVFLAMGLSTGALVAILLCMLILLVMVVLYVSMKRHKKKDTLMSSKEDVRDNVIH
YDDEGGGEEDTNAFDIGTLRNPKAGMRESTPPRRDVQLEAEPVLNPEDTEDIRAYIQQRL
QENHASSTAPPYDSLATYAYEGSGSMADSLSSIESWALEPEEDYRSIQDWGPRFKTLAGI
FSQRESSQGAERRPENRGSQPPAEGSEERPD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggggaactgcttgctgctgttcctctggtgtctcttggacaaaagctttgtc
tctcctatgcactcgtcagctcaaagcaggtcgggaaaagagcaccatcggtgtctgagg
tcggaacagcggcgacatggcgtgtctgggcttcaccgagtcaagaggggctgggtctgg
aaccagttctttgtgctggaggaatacatgggcacggatccgcaatacatcggcaagctg
cacagtgacctggataagggaaataatttggtgaagtacacgctgtcgggagaaggagtg
ggctccattttcaccgtggagccgatcacgggagacattcacgccttgcggagcctggac
cgcgaggagaagccttattacacactgcgggcccaggcggtggacgtgctaacggggagg
ccgctggagcccgagtccgagtttattatcaaagtccaggacatcaacgacaacgagcca
aagttcctggaggggccgtactcggccagcgttcccgagatgtcacccgtaggcacatat
gtgatgcaggtcacagccacagatgcagatgatcccacttacggaagcagcgcccggatc
gtgtacagcatcctacatggacagccgtacttctcagtggaccccaagactggggtgata
aagatcgccttacccaacatggaccgggaggtgaaggagacgtaccaggtgctgatccag
gccaaggacatgggtgggcagctaggaggcctggctgggaccactaccgtcaacatcacc
ctgaatgacgtcaatgacaacccacccagattcgctagaagtatttttcacttacgggtt
ccggaatcggcgccggtcggctcctcggtgggaaagattaaagcacatgatctggacttg
gggaagaatgcagaggtggagtacagcattgttcccggagacagcagctcgatgttcgac
atctacactgatgaacagactcaggagggaatcgtactgctgaaaaagccgctggactat
gagaacagaaaggcctacagttttaaagtggtggcatcaaaccctcacctggacccgcag
ttcctccacctcggcccgtataaagactcggccacagtgaagatcagcgtgctggatgtg
gaggagccacccgtcttcagcaggtcctcctacagcatggagacgtatgaagacacgccc
acaggaattgttattggtgcagtgactgcagaggacctggatgcaggggatagtccagtc
aggtattccattgagtggaagaaggatgctgaaaattactttgacatcgaccctgtcgag
ggcaccataaccaccagcgaagccctggaccgagaggcggaggccaaacacaacgttact
gttgttgcgactaaagttaacaaccccctgctgtacagtcgagttagtgtcaccatcagc
gttctggatgtcaatgagttccccccggaactctcccacccttacgaggcgtttgtttgc
gaagatgcaaaagtaggccaggtggttgagatcctcagtgcaacagacagagacatgcct
catgtaggacaccggttcttcttcaaatctccaagagacgtcagaaataggaacttcacc
atcagagactatggaaataacacggcgggggtggtgacgaggagagcaggcttccagcgg
agagagaagagtgtgtatctggtgccggtggtggtggaggacagtggttatcctatccag
agcagcacggggacgctgagcgtgagagtgtgcgcgtgtgacggcgaggggtccgtactg
tcctgcagcgccgaggctgttttcctggccatgggcctcagcaccggagcgctggtggcc
attctgctctgcatgctcattctgctggtgatggtggttctatacgtgtccatgaagcgg
cacaagaagaaggacaccctgatgtcctcaaaggaggacgtgcgggacaacgtgatccac
tatgatgacgagggcggcggcgaggaggacactaacgcctttgacatcgggacactgcgc
aaccccaaagccgggatgcgggagtcgacgccaccgcgccgggacgtacagctggaggct
gagcctgtcctcaaccccgaggacacagaagacatccgggcatacatacagcagcgtctg
caggagaaccatgcaagcagtacagcgccaccgtacgattccctggccacgtacgcctat
gagggctcgggctcgatggctgactctttgagctcgatcgagtcctgggcgcttgaaccc
gaagaagactaccggtccattcaggactgggggccacggtttaagactcttgccggaatc
ttcagccagagggagtcgtctcaaggtgcggagagacgccccgaaaatagaggcagccag
ccgccggcggagggatcagaggagcggccggactga
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