Astyanax mexicanus (Mexican tetra): 107197307
Help
Entry
107197307 CDS
T05042
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
107197307 (rnf115a)
04121 Ubiquitin system [BR:
amex04121
]
107197307 (rnf115a)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107197307 (rnf115a)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107197307 (rnf115a)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107197307 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
C1_2
HypA
Pcf11_C
zf-RING_6
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
107197307
NCBI-ProteinID:
XP_022519249
Ensembl:
ENSAMXG00000030497
LinkDB
All DBs
Position
6:complement(30703..39701)
Genome browser
AA seq
310 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSGANGLDDTAS
QFAELWQLLFVERPFTVDLDSPDSEPRVPGGGGGLGLSGGPFGGSVPGGLGGGLGGPIGG
GEHWGPGRPPRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIVSQEQADSSMECPV
CKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLSGEDSSSTQPPTEPSLNT
DPRTQERWSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgctgcggttcctccgcaccgcttcttctgtcactgctgtaagggcgag
gtgagccccaaactcccggagtatatctgcccgcgttgtgactctgggtttatcgaggag
gtgacggaagattccagtcttctggacagtggagccaatggccttgatgacacagcttca
cagtttgcagagttgtggcagctgttgtttgtggagaggccgtttacggtggacctggac
agcccagactcggagccacgggttcctggaggcggtgggggtttgggtctgagtgggggg
ccgtttggaggctcggtccccggtgggctcggcggggggctgggaggtcctataggagga
ggagaacactgggggcctggccgtccaccacgcttacacactcagaggagataccggtcc
agaggaagcagccggccggaccgatctccagctgttgagggaatagtacaacagtttctt
gctggactttttgccaattctggagttccaggttcacctccactgtcatggacgggcatg
ctgcactcgaatcctggcgactacgcctggggacagggaggattggacgcagtcattaca
cagttactgggtcagtttgagaacacgggtcctcctcctgcagagaaagagaagatctcg
tcgctccccacagtcatcgtctctcaggaacaggccgacagcagtatggagtgtccggtg
tgtaaagaggactacacggtcggagagccggtcaggcagctgccctgtaaccacttcttc
cacagtgactgcatcgtaccctggctagaactgcatgatacgtgtccagtgtgcaggaag
agtttgagtggagaggacagcagcagcactcagcctccgacagagccatccctaaacact
gacccccgaacacaggagagatggtccttctga
DBGET
integrated database retrieval system
