Astyanax mexicanus (Mexican tetra): 107197361
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Entry
107197361 CDS
T05042
Symbol
wdr55
Name
(RefSeq) WD repeat-containing protein 55
KO
K24750
WD repeat-containing protein 55
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
107197361 (wdr55)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107197361 (wdr55)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_LRRK2
WD40_RFWD3
DUF7899
Beta-prop_ELP1_2nd
WD40_like
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
107197361
NCBI-ProteinID:
XP_022522244
Ensembl:
ENSAMXG00000030433
LinkDB
All DBs
Position
17:complement(1157068..1169906)
Genome browser
AA seq
405 aa
AA seq
DB search
MAAPTETHESLSEEESLGVLEENDSLQDDPDNKPAPKIQETPEDIKQEAIVNTLAFHPKE
DLLAAGDIDGDIYLYRYSCTVGENKELWSSGHHLKSCRKVAFSSDGEKLFSVSKDKAVHI
MDVEAGKLATRIPKAHSKPINALLIVDENIFATGDDEGTLNVWDLRKGTSFMSLKHHEDF
ISGIAVDQAKKILLTSSGDGSMGVFNIKRRRFELLSEIQDGDLTSVSIMKRGQKVVCGSS
EGTMYIFNWNEFGDMSDRFDVQAESVDCIVPITDSILCAASTDGVIRAVNILPNRAVGRI
GQHVGEPVEEIVCSREKRFLASCAHDQLIKFWDISALQSSRVSDYRRRKKKDGRLRALSS
KAFGGAGDFFSGLLDTNQENQQKNTEAQEEESDEEEEEESDSGSD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccacggagacgcatgagtctctctctgaggaggaaagtttgggtgtttta
gaggaaaatgattcactgcaggatgatcctgataataaaccagcgcctaaaatacaggag
actcctgaggatattaaacaggaggctatagtaaatacactggccttccaccctaaagaa
gatctcctcgctgctggagacattgatggagatatttatctgtacaggtactcctgcacg
gtgggggagaacaaagagctgtggtcctctgggcatcacctgaagtcctgcaggaaagtg
gccttctccagtgatggtgaaaaattattcagcgtgtctaaagataaggctgttcacatc
atggatgtggaggccgggaagctggcgacacgtatcccaaaagcccacagtaagcccata
aatgccctgctcatagtcgatgagaatatatttgccactggggacgacgaggggacgctg
aacgtttgggacctgaggaaaggcacttccttcatgtctctgaaacaccatgaagacttc
atcagcggcatcgctgtagatcaggccaagaagatcctgctcacctccagtggtgatgga
tcgatgggtgtatttaacataaagaggaggagattcgagctgctctcagagatccaggat
ggagatcttacttctgtttccataatgaaaagaggacagaaagtggtgtgcggctccagt
gaaggaactatgtatatttttaactggaatgagtttggggatatgagtgatcggtttgat
gtgcaggcggagtctgtggactgcatcgtcccgatcacagacagtattctctgtgctgcc
tctacagatggagtcattcgagccgtcaacattctgccgaatcgggccgtggggaggatc
gggcagcacgtcggtgaaccggtggaggagatcgtctgctctcgggagaaacgcttcctc
gccagctgtgctcacgatcagctcatcaagttctgggacatttccgccctgcagagcagc
agagtcagcgactaccggcgccgcaagaagaaggacgggcgtctccgagcgctcagcagc
aaagcgttcggaggagccggagacttcttctccggattactggatacaaaccaggagaac
cagcagaaaaacactgaagctcaggaggaagaaagtgatgaagaggaggaggaggagagc
gacagcgggagcgactaa
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