KEGG   Astyanax mexicanus (Mexican tetra): 107197361
Entry
107197361         CDS       T05042                                 
Symbol
wdr55
Name
(RefSeq) WD repeat-containing protein 55
  KO
K24750  WD repeat-containing protein 55
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    107197361 (wdr55)
Domain-containing proteins not elsewhere classified [BR:amex04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   107197361 (wdr55)
SSDB
Motif
Pfam: WDR55 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_ACSF4 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_LRRK2 WD40_RFWD3 DUF7899 Beta-prop_ELP1_2nd WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 107197361
NCBI-ProteinID: XP_022522244
Ensembl: ENSAMXG00000030433
LinkDB
Position
17:complement(1157068..1169906)
AA seq 405 aa
MAAPTETHESLSEEESLGVLEENDSLQDDPDNKPAPKIQETPEDIKQEAIVNTLAFHPKE
DLLAAGDIDGDIYLYRYSCTVGENKELWSSGHHLKSCRKVAFSSDGEKLFSVSKDKAVHI
MDVEAGKLATRIPKAHSKPINALLIVDENIFATGDDEGTLNVWDLRKGTSFMSLKHHEDF
ISGIAVDQAKKILLTSSGDGSMGVFNIKRRRFELLSEIQDGDLTSVSIMKRGQKVVCGSS
EGTMYIFNWNEFGDMSDRFDVQAESVDCIVPITDSILCAASTDGVIRAVNILPNRAVGRI
GQHVGEPVEEIVCSREKRFLASCAHDQLIKFWDISALQSSRVSDYRRRKKKDGRLRALSS
KAFGGAGDFFSGLLDTNQENQQKNTEAQEEESDEEEEEESDSGSD
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggcggcgcccacggagacgcatgagtctctctctgaggaggaaagtttgggtgtttta
gaggaaaatgattcactgcaggatgatcctgataataaaccagcgcctaaaatacaggag
actcctgaggatattaaacaggaggctatagtaaatacactggccttccaccctaaagaa
gatctcctcgctgctggagacattgatggagatatttatctgtacaggtactcctgcacg
gtgggggagaacaaagagctgtggtcctctgggcatcacctgaagtcctgcaggaaagtg
gccttctccagtgatggtgaaaaattattcagcgtgtctaaagataaggctgttcacatc
atggatgtggaggccgggaagctggcgacacgtatcccaaaagcccacagtaagcccata
aatgccctgctcatagtcgatgagaatatatttgccactggggacgacgaggggacgctg
aacgtttgggacctgaggaaaggcacttccttcatgtctctgaaacaccatgaagacttc
atcagcggcatcgctgtagatcaggccaagaagatcctgctcacctccagtggtgatgga
tcgatgggtgtatttaacataaagaggaggagattcgagctgctctcagagatccaggat
ggagatcttacttctgtttccataatgaaaagaggacagaaagtggtgtgcggctccagt
gaaggaactatgtatatttttaactggaatgagtttggggatatgagtgatcggtttgat
gtgcaggcggagtctgtggactgcatcgtcccgatcacagacagtattctctgtgctgcc
tctacagatggagtcattcgagccgtcaacattctgccgaatcgggccgtggggaggatc
gggcagcacgtcggtgaaccggtggaggagatcgtctgctctcgggagaaacgcttcctc
gccagctgtgctcacgatcagctcatcaagttctgggacatttccgccctgcagagcagc
agagtcagcgactaccggcgccgcaagaagaaggacgggcgtctccgagcgctcagcagc
aaagcgttcggaggagccggagacttcttctccggattactggatacaaaccaggagaac
cagcagaaaaacactgaagctcaggaggaagaaagtgatgaagaggaggaggaggagagc
gacagcgggagcgactaa

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