Astyanax mexicanus (Mexican tetra): 107197485
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Entry
107197485 CDS
T05042
Symbol
si:dkey-119f1.1
Name
(RefSeq) structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
107197485 (si:dkey-119f1.1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107197485 (si:dkey-119f1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
Laminin_II
AAA_13
GAS
AAA_29
Baculo_PEP_C
Crescentin
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
107197485
NCBI-ProteinID:
XP_049329346
Ensembl:
ENSAMXG00000034179
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MSKRKSSQTSEGPRKRVRPSTAESSENEGEGICSIQDSRGDSASGEVGIIEKIFLKNFMC
HSLLGPFTFGSNVNFVVGNNGSGKSAILTALIVGLGGKAQTTNRGSSLKGFVKEGESSAE
ISITLRNRGQDAYKPDVFGESITIDLRISSEGLRTYKLKSNTGYLVSSKKEELVSILDHF
SIQVDNPVSVLTQEMSKHFLHSKGEGDKYRFFMKATQLEQMKEDYNYIMETKTVTQNTVE
KHEEILQDLRRKYKQKEEKYKNLASIDDMQEKLEKLKHQMAWALVSEMEQEVEQMRKRTA
EEERSTVKYDQKVEEWKEKVAEAEQRYKQFHNQLESVTERVQKLQPECGQYRSRAQECSK
AFRTTEAAFHRQKTAVRDLERDKEQLARRISELKLSITQSSAADSQARVQQMDHLQSELD
ALIFQETTLAQQIDQFQQACTSSKDNLSRMRREEQDLQRAVDSKQRDLSALEGSRHGGLR
RFGEQMPAFLAAIDEAHRKGQFRKKPVGPLGFCIRLQDADYALAVESCLKALMLAFCCDN
YADERVLQALMIRSFPQGRRPQIIVSEFIETPYNISNRAVNHPEFPTVLQALDIDNPVVA
NCLIDMRGIETVLLIKNSKDARRVMQGGNPPRNCREAFTREGDQVYSNRYYSSDQQRAHY
LSRDVEQEIRNLQAAIRTQETQVQGFRQQVRDVQDNIRQTEALLKRALNDHKTVKDRCRK
LRLEINDLRNVEEPQSEDLKPLEDELGELSSRLDACREECEAARQQMLTSKRVHEEAEQL
YRQHRETLNSVAEEAEPIKEELSKSDQEVEKSKHHKKHYEEKRKTHIAQIQTQRNTLEEK
EQQLQASTEKACEISPERIDIRRTAKSLDTEINHLKRKIITQQEQHGDRDTIIREYQESL
ESYNITAQQVKCLKHFTHLLGKIMDTRHDVYTEMRRYLSVRCKYYFDSMLSQRGYTGSMT
FNHKTEALSISVQPGEGDKAALSDMRSLSGGERSFSTVCFVLSLWAIAEAPFRCLDEFDV
YMDMVNRRISMDMMLKIAASQRYRQFIFLTPQSMSSLPVNNLIRILRLKDPDRSQSVLPF
GQQEA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaggaagagcagtcaaacttcagaaggtccacgaaaaagagtgagaccttca
acagcagaatcatcagaaaacgagggagaaggaatatgttccattcaggacagccgagga
gacagtgcctcaggggaagttggtattatagagaagatctttctgaagaacttcatgtgt
cattctttgcttggtccctttacgttcggctcaaatgtgaacttcgttgttggaaacaat
ggaagtggtaaaagtgcgatactgacggctctgattgtgggtctgggaggaaaagcacag
accaccaacaggggctcttcactcaaaggctttgttaaagaaggagagagctctgcagaa
atctccatcactctgaggaaccgaggccaagatgcttataaacccgacgtgttcggagag
tccatcaccatcgacctgcgcatctccagcgaaggcctgagaacctacaaactgaagagt
aacaccggttatcttgtttcctcaaaaaaggaggaactggtctctattcttgatcacttc
agtattcaggtggataatccggtttctgtgctgactcaggaaatgagtaaacacttcctc
cactctaaaggagagggagataagtacagattttttatgaaggccactcagctggagcag
atgaaagaagattataactacattatggagacaaagactgttacccagaacacagtggag
aaacatgaggagattctgcaggacttgcggcgtaaatataagcaaaaggaggagaagtat
aagaatctggcctctattgatgacatgcaggagaaactggagaagctgaagcatcagatg
gcctgggctctggtgagtgaaatggagcaggaagtggagcagatgaggaagaggacggcg
gaggaggagagatctactgttaagtatgatcagaaagtggaggagtggaaggagaaggta
gcagaagctgagcagaggtataagcagttccacaaccagttggagagcgttactgagcgc
gtgcagaagctgcagccggagtgtgggcagtatcgcagccgagcgcaggagtgcagcaaa
gccttcagaaccactgaggctgcgtttcacaggcagaagacggcggtcagggacttggag
cgggataaagagcagctggcccggcgtatcagtgagctgaagctcagcatcactcagtcg
agtgcggcggacagtcaggcccgcgtgcagcagatggatcatctccagtctgagctggat
gctctgatcttccaggagaccacgctggcccagcagatcgatcagttccagcaggcctgc
accagctccaaagacaacctcagcaggatgaggcgtgaggagcaggatctgcagcgtgct
gtagactctaagcagcgtgatctctctgctctggagggcagtaggcacggtggactccgc
cgctttggagagcagatgccggcgtttttagccgctatagacgaagctcatcgcaaagga
cagttccgcaaaaaacctgttgggccgcttggattctgtatccggctgcaggatgcagac
tatgctcttgcagtggagagctgtctgaaggctctgatgctggcgttctgctgtgataac
tacgcagatgagcgagttctacaggctctgatgatcagaagcttcccacagggacgaaga
cctcagattattgtcagtgaatttattgaaacgccgtacaacatcagtaacagggctgta
aatcatcctgaattcccaacagttcttcaggccctggacatcgacaacccagtggtggcc
aattgcttgattgatatgaggggaatagagactgtgctgcttattaaaaacagtaaagat
gctcggagagtgatgcagggaggaaatcctcctcgtaactgtagagaggcgtttactcgt
gaaggagatcaggtctacagcaaccgctactattcctcagaccagcagagggcgcactac
ctcagccgagacgtggagcaggaaatcaggaatttacaagcagctataagaactcaggag
acgcaggtgcagggcttcaggcagcaggttcgagacgttcaagacaacattcgtcagact
gaagctctgctgaagagagctcttaatgatcacaaaacagtgaaggatcgctgcagaaag
ctgcgtttggagatcaatgacttgaggaacgtagaggaaccgcagtcagaggacctgaag
cctctggaggatgagttgggggagctgagcagcaggttagatgcgtgtcgtgaggagtgt
gaggcggcgcggcagcagatgctcacctcgaagagagtgcacgaggaagcagaacagctg
taccggcagcacagagagaccttaaacagcgtggctgaggaggcagaacccattaaggag
gagctgagtaagagtgatcaagaagtagagaagagcaagcaccataagaaacattatgag
gagaagcgtaaaacacacattgcccaaatccagacacagagaaacacactggaggaaaag
gaacaacagttacaggcgtccacagaaaaggcctgtgagatttcccccgagcgaatagat
ataaggagaacagccaagagcctcgacaccgagatcaaccatttaaaacgtaaaattatc
acacagcaagaacagcatggagacagggacaccataataagggagtaccaggagtcgttg
gagagctacaatatcactgcacagcaagtaaagtgcctcaaacacttcacccatctactg
ggcaagatcatggacacgcggcatgatgtctacactgaaatgaggaggtatctttctgtg
cgttgtaagtactactttgactccatgttgtcgcagagaggatacacaggatccatgacc
tttaaccacaagacggaggcgctctccatctcagtgcagccaggtgagggtgataaggcc
gctctgagtgatatgcgctctctctccggaggtgaacgctccttctccacggtgtgcttt
gttttatctctgtgggcgatagctgaagctccgttccgctgcctggatgagtttgatgtc
tacatggacatggtgaaccggcggatttctatggacatgatgttgaagattgcagcgagt
cagcgctacagacagttcatcttcctcactccacagagcatgagttctctccctgtgaat
aatctgatccggatcctgcgtctgaaagatccagaccgcagtcagtctgttctgccgttt
ggtcagcaggaggcgtga
DBGET
integrated database retrieval system
