Astyanax mexicanus (Mexican tetra): 107197536
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Entry
107197536 CDS
T05042
Symbol
atoh1b
Name
(RefSeq) protein atonal homolog 1b
KO
K09083
atonal protein 1/7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
107197536 (atoh1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
107197536 (atoh1b)
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Paralog
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
107197536
NCBI-ProteinID:
XP_049324215
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Position
19:3093672..3103575
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AA seq
376 aa
AA seq
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MPPGGRPRARGGHGGGTARGQRRSMVLKRARPAENSCYWLHLPGEGVEVVGGGTKKAIKE
PGGRQDRTKRRQDRISGGFIFTAGSGAEFLQRVRIRSGCFLYFLSVKVQAWTSVEFTDLL
RLLLFFTPSAGMTSNTKVLSWSDVNMPKQLEAFSLSEHPRVTCADLRGWISPAGHSYTPA
GLRSVYTHASLDVTLDKCAGSPAPTVPEEENNRDKESGAKQQQQQHLSAPQRHRRVAANA
RERRRMHGLNRAFDKLRSVIPSLENEKKLSKYDTLQMAQIYIAELSELLEGVVRSECRSP
YQTERIIRTCPVETPTLAPACLERDAGVPEGRLLILSTPTVHYSPEKKSEVITLSSASDG
ESSHFSDAEDGQSRGC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccccccggtgggagacctcgcgcccggggcggacacgggggcggtactgcgcgtggc
cagaggcgcagcatggtgctgaagcgtgctcggccggcggagaactcctgctattggctg
cacctcccaggggagggggtggaggtggtgggcgggggcactaaaaaggcaatcaaggaa
cctggagggaggcaagacaggaccaagaggaggcaagacaggatctcaggaggcttcatc
ttcactgcaggatcaggagctgagttccttcagagagtcagaatcagatcaggctgtttt
ctgtattttctcagtgttaaagttcaggcctggacatctgtggagttcacagatctgctg
cgtctgctgctgttcttcacaccctctgcaggaatgacttccaacactaaagtcctgagc
tggtcagatgtgaacatgcccaaacagctggaggctttctctctgtctgaacatcccaga
gtgacctgcgctgacctgcgaggctggatcagccctgctggacactcctatacacccgcc
ggactgcgctcagtgtacacccacgcctcgttggacgtcacgctggataaatgtgcagga
agccccgcccctactgttccagaagaggaaaacaacagagacaaagagtccggggccaaa
cagcaacagcagcagcacctgagcgccccccagaggcaccggcgggtggcggcgaacgcc
cgggagaggcggcggatgcacggtctgaaccgggctttcgataagctgcggagcgtcatt
ccgtctctggagaacgagaagaagctctccaagtacgacacgctgcagatggcccagatc
tacatcgccgagctgtccgagctgctggagggcgtggtcaggtccgagtgcaggagcccc
tatcaaacggagcggatcataaggacatgtccggtggagacgcccactctggctccggcg
tgcctcgaacgagacgccggcgtccctgagggacgtctgctcatcctgtccacacctact
gtccactacagtccagagaagaagagcgaggtcatcacactgtccagcgccagcgacgga
gagtcgtcccacttcagcgacgccgaggacggacagtccagggggtgctga
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