Astyanax mexicanus (Mexican tetra): 111189369
Help
Entry
111189369 CDS
T05042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111189369
04121 Ubiquitin system [BR:
amex04121
]
111189369
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111189369
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111189369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
Siah-Interact_N
OrsD
Motif
Other DBs
NCBI-GeneID:
111189369
NCBI-ProteinID:
XP_049331047
LinkDB
All DBs
Position
2:complement(27799917..27846996)
Genome browser
AA seq
634 aa
AA seq
DB search
MASGSGERRLPRPEMKDAPALFKSGVWDHFGFPVTYDDTGNKNVDRTVTICKHCKTRIAY
ASGNTSNMTGHLRRHHPSVSVEGRRGEPAKKPFTISAAFKQPLAEDTAKAKSISKAIGIF
IAKDMQPYSVVEGEGFRNMIKVLEPRYVMPSRRYFGTNVILNLYEETSVDIVKELSEACQ
IALTTDGWTSRSTESYLTVTAHYITPQWELRSCVLQTRPIYESHTSKILSEKLREVVEEW
KLERDNGTIPVTTDNANNIVNAVGLTEGLGPQISCFAHTVNLAAKSAISTAQISRLLAKV
RKVVTFFHRSTTAAFILKTKQDMLTLPDHKLIHDVPTRWNSTYDMLERYVEQQAALYSAV
TDKNMKKKPKDISLLTDSETKLTEGLIDVLKPLKNVTTLMSTETSPSVSMIMPLQRMVLK
AMAPSADDSSTIKDAKAAITKDLQSRYSDHSIQDYLHRATALDPRFKSLPYLDEACVQKI
WDDLTLEIVNLEEQAQQHCEAQAASSSSAAESEPSETSPPPKKSAMATVFADFFTTEARS
TKPLPETIREEVTSYKETSCISVDEDPLAWWKTNAHKYPHVAKLAQRDLAVPGTSVPSER
VFSTAGDIVTASRSRLLPENVDKLIFMQKNMRIK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgggagtggagaacgcaggctgcctaggccagagatgaaggatgccccagcg
ttgtttaaatcaggtgtgtgggatcatttcggattccccgtcacatacgatgatactggc
aataaaaacgtggatcgaactgttacaatatgcaagcattgcaaaacccgcattgcatac
gctagtggaaacacttccaatatgaccggccatttacgaagacatcacccaagtgtgtca
gtagaggggaggagaggagagcctgccaaaaagccattcacaatcagcgcggcatttaaa
cagcccctggctgaggacaccgccaaggcgaaatcaatttccaaagccataggtatattc
attgcaaaggacatgcagccctacagcgtagtggagggcgaaggctttaggaatatgata
aaggtgctggagccgcggtacgtcatgccctctcgtagatactttggcaccaatgtgata
ctgaacttatatgaagagacaagtgtggacatagttaaggagttatctgaggcatgccaa
atagctctgacgacggatggatggacttccaggtccaccgaaagttaccttacagtgact
gcccactacattactccccaatgggagttacgaagctgcgtattacaaacgcgcccaata
tatgagagtcacacaagcaaaattctctccgaaaagctaagagaggtggtggaggaatgg
aaattggagagggacaacggcaccatccctgtcacgactgacaatgccaacaacatagtg
aatgcagtaggtttgacggagggacttgggccacagatatcctgctttgctcacacagtc
aacctggcagccaaaagcgccatctctacagcccaaatctcacgactgctggcgaaggtc
agaaaggtggtcacttttttccatcgaagcacaacagccgccttcatcttgaaaacaaag
caggacatgctgacactgccagaccacaagttaattcacgacgtgccaacgcgctggaac
tccacatacgatatgttagagcgctatgtggagcaacaggcggccctctattccgcggtg
acggacaaaaatatgaaaaaaaaacccaaggacatttccctgttaaccgacagtgaaaca
aagctgacagagggcctcattgatgttcttaaacctttgaagaatgtgactaccctgatg
agcacagaaacatctccctctgtctcaatgattatgccactgcagaggatggtactgaaa
gcaatggcaccaagtgcagacgacagttccaccatcaaagatgccaaggcagccatcacc
aaggatcttcaaagcagatacagtgaccatagtattcaggattatctgcacagagccaca
gcactggatcccaggttcaagtccttgccttatctggatgaagcctgcgttcagaaaatc
tgggatgatctcacattggaaattgtaaacctcgaagagcaggctcaacaacactgtgaa
gctcaggcagccagttcatcctcagcagcggaatctgagccttcagagacctctcctccc
cccaagaaatctgccatggcaacagtttttgcagatttttttacaacagaggcaagaagt
acaaagcctttgccagaaaccattcgtgaagaggtcacctcatacaaggaaacaagctgc
atttctgtggatgaagatcccctcgcatggtggaaaaccaacgcacataagtatccccat
gtagcaaagttggcacaacgtgacctggctgtcccaggtacatctgtgccaagtgagcgt
gttttttccacagcaggggacattgtcactgcaagtaggtctcgcctcttgccagaaaat
gttgacaaactgattttcatgcagaagaatatgagaattaagtga
DBGET
integrated database retrieval system
