Astyanax mexicanus (Mexican tetra): 111189856
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Entry
111189856 CDS
T05042
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111189856
04121 Ubiquitin system [BR:
amex04121
]
111189856
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111189856
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111189856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Sulfotransfer_4
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
111189856
NCBI-ProteinID:
XP_022519279
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MASADKDVLPELEAAPASLKSAVWKYFAFPVSYVASVRVVDRNTTVCKMCYMRVPYPATG
NTTNMAAHIRRHHKDVDLTGKTSSLVQPTIQSSFVVKLAQTSARAEAITNAIGLFIAADL
QPYSVVENTGFKHLISVLEPRYSIPSRSHLTTKVLPSMYEDTKENVLRGLSNAELIAITT
DGWTSRATESYITVTAHYVNNEWEIESPVLQTRPIYESHTSDNLAEVLQEAVLEWKLDRQ
NTTIPVTTDNAKNIVNASNAAGLSPHIGCFAHTVNLASQKGLGVNQISRLLGKVRRVVTF
FHKSTTAAAVLKAKQEMLQLPPHKLIQDVATRWNSSYDMLTRYLEQQAAVYSALTEKDVK
KNAKDLITLSDQDVTVLEDVVEVLKPMKTITTLLSSEQQPTVSMILPLKHSILTAMKHSG
TDSQIVKDVKSAIATNIEGRYSNPSLQQFLNESTALDPRFKSLPHLDDPSRKEIFNNLAE
KIIQRHPTQDPGQGTSQNPPEDPETAASSEGSPPAKRTTLSELFGDFYSTAPTTPTTPEL
WPDVVKEEIELYRMAKVISVDANPLKWWKNNEHQYPNLSKLSKHYLAVQATSVASERVFS
TAGDIVTAQRAALSPDNVDILIFLKKNLKI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgcagataaggacgtcttaccagagctggaagccgctcctgcttctcttaaa
tcagcagtatggaagtattttgcgttcccggtgagttatgtcgccagcgttcgtgttgtc
gacaggaacacaacagtgtgcaagatgtgctacatgcgtgtaccatacccggctacggga
aacactacgaacatggctgcacacattcgccggcatcacaaagatgttgatttgactgga
aaaacatcatcattggtccagccaactattcaatcttcgtttgtagtaaaattggcacag
acctcagctcgcgctgaagcaataactaacgcgatagggctattcatagcagcagacctg
cagccttattcagtggtggaaaacactgggtttaaacatttaatcagtgtacttgagcca
cgctacagtattcccagcaggtcgcatcttacaaccaaagtgttgccctccatgtatgaa
gacacaaaagaaaacgttttgaggggtctaagcaatgcagagttaattgccataacaaca
gatggctggacctcaagagcaactgagagctacattacagtgacggcacactatgtcaat
aatgaatgggagattgaaagtccagtccttcaaactcgccctatctatgaatcacacaca
agtgataatttggcagaagtgctacaggaggcagtattggaatggaaactggatagacaa
aatacaaccatccctgtgaccacagataatgccaaaaacattgtcaatgcctcaaatgca
gctggattgtcaccacatataggttgttttgcacacacagtaaacctggcatcccagaag
ggattgggagtaaaccagatttctcgtcttttgggcaaagtcaggagagtggtcaccttc
tttcataagagcacgactgcagcagctgtcttaaaggccaaacaagagatgctccagctt
cctcctcacaagctgattcaagatgtcgctacaaggtggaactccagctatgacatgctt
acacgctacttagagcaacaagctgctgtttattctgcactcacagaaaaagatgttaaa
aagaatgccaaagatctcatcacactttctgatcaagatgtgactgttctggaggatgtg
gttgaggttctgaagcccatgaaaacaatcacaactctattgagctcagaacagcagccc
actgtgtctatgatcctgccactcaaacactccattctcacagcgatgaaacacagtggc
acagattcacagattgtgaaggatgttaaatcggctatagcaaccaacattgaagggagg
tactcaaatcccagtcttcaacagtttctgaatgagagcactgccttggaccctcggttc
aaatctttacctcatctggatgacccctctcggaaagagatattcaacaatctggctgag
aaaatcatacaaaggcatcccacacaggacccaggacaagggaccagccaaaacccccca
gaggacccagaaactgcagcatccagtgaaggcagccccccagcaaagagaaccacactc
agtgaactgtttggtgacttttatagcacagcccccactacaccaacaacaccagaatta
tggcctgatgttgtcaaggaggagattgagctatacaggatggcaaaagtaatttctgtg
gatgcaaatccactgaaatggtggaaaaacaatgagcatcagtatccaaatttgtccaag
ctttccaaacattatcttgctgtgcaagcaacaagtgtagcaagtgagcgagtgttctcc
acggcaggggatattgtgactgctcaaagagcagccctttctccagacaatgtggacatt
ctcatctttttaaagaaaaacttaaaaatataa
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