KEGG   Astyanax mexicanus (Mexican tetra): 111189978
Entry
111189978         CDS       T05042                                 
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
  KO
K24889  iroquois-class homeodomain protein IRX
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    111189978 (irx1b)
Transcription factors [BR:amex03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    111189978 (irx1b)
SSDB
Motif
Pfam: Homeobox_KN Homeodomain YL1 MRP-S32
Other DBs
NCBI-GeneID: 111189978
NCBI-ProteinID: XP_022519438
Ensembl: ENSAMXG00000029124
LinkDB
Position
3:complement(38192955..38197301)
AA seq 411 aa
MALPQLGFLYGLDGAHAPPDGISEGAAALAPLFTPAWSARGYTGAFARTGAELALLAHMG
SQYELKDSPGAQAAGLALHTPPAFYPYNHYQYGDPSRAKSATRETTSTLKAWLQEHKRNP
YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGRSADDVDGRLFESDNDEEL
DKNEEEEDEEEEIDLETIDIDKAEGERADLSEENAEEQQDGRENAQTPQEPASPELKSAA
SPVSNKAQSAGEVSPRAADSHRPANAKPKIWSLAETATSPDHCHRASVPSAIPHPAFLST
SGIYTCQVGRGDNWAFLSASSLLGVRSMLGGNESEIVQCTPRAAVTHSSSTLRPPCVKTH
TEKESRSFRPQQNDENIERVESPTLSLRAPFPVIHDRSHHETAQRALKSIS
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggctctgccccagctgggtttcctctacggactggacggagcgcacgcgccgccggac
gggatctccgagggcgccgccgcgctcgcgcccctcttcacgcccgcctggagcgcgcgc
ggctacaccggcgcgttcgcgcgcaccggagccgagctcgcgctgctggcgcacatgggt
tctcagtatgagctgaaggactctccaggggctcaggccgcaggcctggccctccacacc
ccacccgctttctacccctacaaccactaccagtacggcgaccccagcagagccaaaagc
gccaccagagagaccaccagcacccttaaggcgtggcttcaggagcacaagaggaacccg
taccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgccaggagaaggctgaagaaggagaacaaggtcacgtgg
gggcgcagcgcggatgatgtggatggcaggttgtttgagagcgataacgatgaagagttg
gacaaaaacgaggaggaagaggacgaggaggaagagattgatctggaaaccatcgatata
gacaaggctgaaggagagcgcgcggatctgagcgaggagaacgcggaggagcagcaggac
gggagggaaaacgcacagaccccgcaggaaccagcatctccagagctgaagagcgcggcg
agcccggtgtccaacaaagcgcagagcgccggggaggtttcccccagagcagcggactct
caccggccagcaaacgcaaaaccaaagatctggtcgctcgcggagacagccacgagccca
gatcactgccacagagccagcgttccctccgccatcccgcacccggccttcctttccacc
agcggtatctacacgtgccaggttggcagaggagataactgggccttcctcagcgcgagc
tctctgctcggtgtgagatccatgctgggagggaacgaaagcgaaatcgtgcagtgtacg
ccgcgcgccgccgttacgcacagcagcagcacgctcaggccgccgtgcgtaaaaacgcac
acagagaaggaatcccgcagcttcagaccgcaacagaacgatgaaaacatcgagagagtt
gaatctcccacactttcgctgagggcccctttcccagtcatccatgacaggtctcaccac
gaaacagcacagcgggctctgaagagcatttcctga

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