Astyanax mexicanus (Mexican tetra): 111189978
Help
Entry
111189978 CDS
T05042
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111189978 (irx1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111189978 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
YL1
MRP-S32
Motif
Other DBs
NCBI-GeneID:
111189978
NCBI-ProteinID:
XP_022519438
Ensembl:
ENSAMXG00000029124
LinkDB
All DBs
Position
3:complement(38192955..38197301)
Genome browser
AA seq
411 aa
AA seq
DB search
MALPQLGFLYGLDGAHAPPDGISEGAAALAPLFTPAWSARGYTGAFARTGAELALLAHMG
SQYELKDSPGAQAAGLALHTPPAFYPYNHYQYGDPSRAKSATRETTSTLKAWLQEHKRNP
YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGRSADDVDGRLFESDNDEEL
DKNEEEEDEEEEIDLETIDIDKAEGERADLSEENAEEQQDGRENAQTPQEPASPELKSAA
SPVSNKAQSAGEVSPRAADSHRPANAKPKIWSLAETATSPDHCHRASVPSAIPHPAFLST
SGIYTCQVGRGDNWAFLSASSLLGVRSMLGGNESEIVQCTPRAAVTHSSSTLRPPCVKTH
TEKESRSFRPQQNDENIERVESPTLSLRAPFPVIHDRSHHETAQRALKSIS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctctgccccagctgggtttcctctacggactggacggagcgcacgcgccgccggac
gggatctccgagggcgccgccgcgctcgcgcccctcttcacgcccgcctggagcgcgcgc
ggctacaccggcgcgttcgcgcgcaccggagccgagctcgcgctgctggcgcacatgggt
tctcagtatgagctgaaggactctccaggggctcaggccgcaggcctggccctccacacc
ccacccgctttctacccctacaaccactaccagtacggcgaccccagcagagccaaaagc
gccaccagagagaccaccagcacccttaaggcgtggcttcaggagcacaagaggaacccg
taccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgccaggagaaggctgaagaaggagaacaaggtcacgtgg
gggcgcagcgcggatgatgtggatggcaggttgtttgagagcgataacgatgaagagttg
gacaaaaacgaggaggaagaggacgaggaggaagagattgatctggaaaccatcgatata
gacaaggctgaaggagagcgcgcggatctgagcgaggagaacgcggaggagcagcaggac
gggagggaaaacgcacagaccccgcaggaaccagcatctccagagctgaagagcgcggcg
agcccggtgtccaacaaagcgcagagcgccggggaggtttcccccagagcagcggactct
caccggccagcaaacgcaaaaccaaagatctggtcgctcgcggagacagccacgagccca
gatcactgccacagagccagcgttccctccgccatcccgcacccggccttcctttccacc
agcggtatctacacgtgccaggttggcagaggagataactgggccttcctcagcgcgagc
tctctgctcggtgtgagatccatgctgggagggaacgaaagcgaaatcgtgcagtgtacg
ccgcgcgccgccgttacgcacagcagcagcacgctcaggccgccgtgcgtaaaaacgcac
acagagaaggaatcccgcagcttcagaccgcaacagaacgatgaaaacatcgagagagtt
gaatctcccacactttcgctgagggcccctttcccagtcatccatgacaggtctcaccac
gaaacagcacagcgggctctgaagagcatttcctga
DBGET
integrated database retrieval system
