Astyanax mexicanus (Mexican tetra): 111190272
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Entry
111190272 CDS
T05042
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04371
Apelin signaling pathway
amex04514
Cell adhesion molecules
amex04520
Adherens junction
amex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111190272
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111190272
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111190272
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111190272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
111190272
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
111190272
04090 CD molecules [BR:
amex04090
]
111190272
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
111190272
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Major cadherins
111190272
CD molecules [BR:
amex04090
]
Proteins
111190272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_4
Ig_ZP2
RibLong
VPDSG-CTERM
Motif
Other DBs
NCBI-GeneID:
111190272
NCBI-ProteinID:
XP_049329097
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MGFIFCYMETLRRVRLGVLLLLLQVLSSSFAELTPCINGFDSEVFIFKVHRPHLHRGRKL
GRVLFNDCAGRGYNIYSSTDQHFQVDVDGTVELKTQLTLHQVQEFSVHAWDSEGKRYTAS
VRVENHHHAQQEETKNMNINVLKLWRQKRRCMLIPPLAVPENQNVPFPKLIAVFKSDFAK
ENTMIYSMKGEGADEPPVGVFIIDKNNGALYVTQPLDRETKDKYVLTVHAVAANGEVEEE
TTEIIIFVIDGNDNKPIFTQNPFLGSVAEASPRDFEFMVANATDADDPDSDHADIRYSII
SQTPPQPDPNMFIINPITGGIRVNSDELDRETYPEYILLIQAADMMGDGLVTTGTAVITV
TDINDHAPQFEKTLYTASVPENKVGSVVVKIPVTDGDDPQTPAWTANFRIFSGNSGGFFS
ISTGPNKQEGIITTVKPLDFEQTNKYTLLVITENDVPFAKPLPTSTATVIVNVQDVNEAP
VFDPAETIISKPEDLEVGTELTVYTATDPDTARAQTVTYRVSNEDRSGWVSIDRDTGLIR
VKSSMDRESPLVKDGKFKVLILAVDDDEVPATGTGTLVIELEDVNDNAPVIEEREITVCS
KNSVPVSLSVTDEDGSGFAAPFTVELHEESRNNWTAGMDDSNTKILLTLKTAIQQGKYSV
VLRVYDSSLHSQDSTIITTVCDCTGEDVWCSDREISGFGLSPILGILGASLALLILVLLL
LLFLRKKRSVKKQPMIPEKTVPVPPTLKRSASFFDDNLKAADTTPQLHCSSGV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggggtttattttctgttatatggagactttaaggagagtacggctgggggttcttctc
cttctactgcaggtactctcctccagctttgctgaactgacgccgtgtataaacggattt
gattcagaggtgttcatttttaaagtgcacagacctcaccttcacagaggcaggaagctg
ggcagagttctcttcaacgactgtgctggtagagggtataacatttacagctctactgac
cagcactttcaggtggatgttgacggcacagtggaactgaagacacagctcactctacac
caagttcaagaattctcagtccatgcctgggattcagagggaaagaggtacactgcttct
gtgagagtggaaaaccatcaccatgcccagcaggaggaaactaagaacatgaatataaat
gttctgaagttgtggagacaaaagagaagatgtatgttgattccaccactcgctgtccca
gagaaccaaaatgtcccattccccaagctgatcgcagtgtttaagtcagattttgcgaag
gaaaatacgatgatctacagcatgaagggtgaaggagcagacgagcctccagtgggggtt
ttcatcattgataaaaacaatggtgcactctatgtaacgcagcctctagacagagagacc
aaagataaatatgtgcttacggttcatgctgttgcagctaatggtgaggttgaggaagaa
actacggagattatcatttttgtaattgatggaaacgataataagcccatcttcacccaa
aaccctttccttggcagtgttgcagaagcttcacctcgagattttgagttcatggtagcg
aatgctacagacgcagacgatcctgacagtgaccatgcagacatcagatactccatcatc
agccagactccaccacagccagatccaaacatgttcatcattaacccgattactggaggg
attagagtgaactctgatgaactggacagagagacttatcctgagtacatcttgctgatc
caagctgcagatatgatgggtgatggcctcgtcaccactggaacagctgttattactgta
actgatatcaacgaccacgcaccacagtttgaaaagaccttgtacactgcatcagtcccg
gagaataaagtaggatctgtggtggtgaagataccagtgactgatggagatgatcctcag
actcctgcctggacggccaacttcaggatctttagtggaaacagtggtggatttttcagc
attagcacaggacccaacaaacaggagggcatcattactactgttaagccattggacttt
gaacagaccaacaagtacactctgctggtgatcacagagaatgatgttccatttgccaaa
cccctccctacatccactgctacagtcatcgtgaatgttcaggatgtaaatgaggcgcca
gtgttcgacccagcggagaccatcatttctaaacctgaagatctggaagttggtactgaa
ctaaccgtttacaccgccactgatccagacacagcgagagctcagacagtgacataccgt
gtatctaatgaagatcgttctggctgggtgagtattgaccgagacactggactgatcaga
gtgaagagctccatggacagagaatctcctttagtgaaagatgggaaatttaaagttctg
atcttggctgtggatgatgatgaagttccagctacaggtacaggaaccctggtgatcgag
ctggaagatgtgaacgataacgctcccgttattgaagagagggagatcacagtgtgcagt
aagaactctgttccagtctcactctctgtaacagatgaggatgggtctggttttgctgct
ccgttcactgttgaactccatgaagagagcaggaataactggactgctgggatggacgac
tcaaatactaaaattctacttacgcttaagactgcaatacaacagggaaaatacagtgtg
gttctgagggtgtatgattccagcctccacagccaagacagcactatcattaccactgta
tgtgactgcactggagaggacgtctggtgctcagacagagaaatttcaggcttcggccta
tcacccatccttggaattctgggggcttcactggctttgctaattctggtcctattgcta
ctcctgttcctgaggaagaagagatcagttaagaaacagccaatgattcccgaaaaaacc
gtccccgtcccaccaaccctgaagagatcagcatccttttttgatgataacctgaaggcg
gctgatacgaccccacagctccactgctcttctggtgtttga
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integrated database retrieval system
