Astyanax mexicanus (Mexican tetra): 111190272
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Entry
111190272 CDS
T05042
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04371
Apelin signaling pathway
amex04514
Cell adhesion molecule (CAM) interaction
amex04517
IgSF CAM signaling
amex04518
Integrin signaling
amex04519
Cadherin signaling
amex04520
Adherens junction
amex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111190272
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111190272
04517 IgSF CAM signaling
111190272
04518 Integrin signaling
111190272
04519 Cadherin signaling
111190272
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111190272
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111190272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
111190272
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
111190272
04090 CD molecules [BR:
amex04090
]
111190272
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
111190272
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Major cadherins
111190272
CD molecules [BR:
amex04090
]
Proteins
111190272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
Ig_ZP2
RibLong
Motif
Other DBs
NCBI-GeneID:
111190272
NCBI-ProteinID:
XP_049329097
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MGFIFCYMETLRRVRLGVLLLLLQVLSSSFAELTPCINGFDSEVFIFKVHRPHLHRGRKL
GRVLFNDCAGRGYNIYSSTDQHFQVDVDGTVELKTQLTLHQVQEFSVHAWDSEGKRYTAS
VRVENHHHAQQEETKNMNINVLKLWRQKRRCMLIPPLAVPENQNVPFPKLIAVFKSDFAK
ENTMIYSMKGEGADEPPVGVFIIDKNNGALYVTQPLDRETKDKYVLTVHAVAANGEVEEE
TTEIIIFVIDGNDNKPIFTQNPFLGSVAEASPRDFEFMVANATDADDPDSDHADIRYSII
SQTPPQPDPNMFIINPITGGIRVNSDELDRETYPEYILLIQAADMMGDGLVTTGTAVITV
TDINDHAPQFEKTLYTASVPENKVGSVVVKIPVTDGDDPQTPAWTANFRIFSGNSGGFFS
ISTGPNKQEGIITTVKPLDFEQTNKYTLLVITENDVPFAKPLPTSTATVIVNVQDVNEAP
VFDPAETIISKPEDLEVGTELTVYTATDPDTARAQTVTYRVSNEDRSGWVSIDRDTGLIR
VKSSMDRESPLVKDGKFKVLILAVDDDEVPATGTGTLVIELEDVNDNAPVIEEREITVCS
KNSVPVSLSVTDEDGSGFAAPFTVELHEESRNNWTAGMDDSNTKILLTLKTAIQQGKYSV
VLRVYDSSLHSQDSTIITTVCDCTGEDVWCSDREISGFGLSPILGILGASLALLILVLLL
LLFLRKKRSVKKQPMIPEKTVPVPPTLKRSASFFDDNLKAADTTPQLHCSSGV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggggtttattttctgttatatggagactttaaggagagtacggctgggggttcttctc
cttctactgcaggtactctcctccagctttgctgaactgacgccgtgtataaacggattt
gattcagaggtgttcatttttaaagtgcacagacctcaccttcacagaggcaggaagctg
ggcagagttctcttcaacgactgtgctggtagagggtataacatttacagctctactgac
cagcactttcaggtggatgttgacggcacagtggaactgaagacacagctcactctacac
caagttcaagaattctcagtccatgcctgggattcagagggaaagaggtacactgcttct
gtgagagtggaaaaccatcaccatgcccagcaggaggaaactaagaacatgaatataaat
gttctgaagttgtggagacaaaagagaagatgtatgttgattccaccactcgctgtccca
gagaaccaaaatgtcccattccccaagctgatcgcagtgtttaagtcagattttgcgaag
gaaaatacgatgatctacagcatgaagggtgaaggagcagacgagcctccagtgggggtt
ttcatcattgataaaaacaatggtgcactctatgtaacgcagcctctagacagagagacc
aaagataaatatgtgcttacggttcatgctgttgcagctaatggtgaggttgaggaagaa
actacggagattatcatttttgtaattgatggaaacgataataagcccatcttcacccaa
aaccctttccttggcagtgttgcagaagcttcacctcgagattttgagttcatggtagcg
aatgctacagacgcagacgatcctgacagtgaccatgcagacatcagatactccatcatc
agccagactccaccacagccagatccaaacatgttcatcattaacccgattactggaggg
attagagtgaactctgatgaactggacagagagacttatcctgagtacatcttgctgatc
caagctgcagatatgatgggtgatggcctcgtcaccactggaacagctgttattactgta
actgatatcaacgaccacgcaccacagtttgaaaagaccttgtacactgcatcagtcccg
gagaataaagtaggatctgtggtggtgaagataccagtgactgatggagatgatcctcag
actcctgcctggacggccaacttcaggatctttagtggaaacagtggtggatttttcagc
attagcacaggacccaacaaacaggagggcatcattactactgttaagccattggacttt
gaacagaccaacaagtacactctgctggtgatcacagagaatgatgttccatttgccaaa
cccctccctacatccactgctacagtcatcgtgaatgttcaggatgtaaatgaggcgcca
gtgttcgacccagcggagaccatcatttctaaacctgaagatctggaagttggtactgaa
ctaaccgtttacaccgccactgatccagacacagcgagagctcagacagtgacataccgt
gtatctaatgaagatcgttctggctgggtgagtattgaccgagacactggactgatcaga
gtgaagagctccatggacagagaatctcctttagtgaaagatgggaaatttaaagttctg
atcttggctgtggatgatgatgaagttccagctacaggtacaggaaccctggtgatcgag
ctggaagatgtgaacgataacgctcccgttattgaagagagggagatcacagtgtgcagt
aagaactctgttccagtctcactctctgtaacagatgaggatgggtctggttttgctgct
ccgttcactgttgaactccatgaagagagcaggaataactggactgctgggatggacgac
tcaaatactaaaattctacttacgcttaagactgcaatacaacagggaaaatacagtgtg
gttctgagggtgtatgattccagcctccacagccaagacagcactatcattaccactgta
tgtgactgcactggagaggacgtctggtgctcagacagagaaatttcaggcttcggccta
tcacccatccttggaattctgggggcttcactggctttgctaattctggtcctattgcta
ctcctgttcctgaggaagaagagatcagttaagaaacagccaatgattcccgaaaaaacc
gtccccgtcccaccaaccctgaagagatcagcatccttttttgatgataacctgaaggcg
gctgatacgaccccacagctccactgctcttctggtgtttga
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