KEGG   Astyanax mexicanus (Mexican tetra): 111190272
Entry
111190272         CDS       T05042                                 
Name
(RefSeq) cadherin-1-like
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04371  Apelin signaling pathway
amex04514  Cell adhesion molecule (CAM) interaction
amex04517  IgSF CAM signaling
amex04518  Integrin signaling
amex04519  Cadherin signaling
amex04520  Adherens junction
amex05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    111190272
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    111190272
   04517 IgSF CAM signaling
    111190272
   04518 Integrin signaling
    111190272
   04519 Cadherin signaling
    111190272
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    111190272
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    111190272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    111190272
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amex04515]
    111190272
   04090 CD molecules [BR:amex04090]
    111190272
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    111190272
Cell adhesion molecules [BR:amex04515]
 Cadherins
  Major cadherins
   111190272
CD molecules [BR:amex04090]
 Proteins
  111190272
SSDB
Motif
Pfam: Cadherin Cadherin_pro Cadherin_FAT4_N Ig_CLSTN Ig_ZP2 RibLong
Other DBs
NCBI-GeneID: 111190272
NCBI-ProteinID: XP_049329097
LinkDB
Position
Unknown
AA seq 773 aa
MGFIFCYMETLRRVRLGVLLLLLQVLSSSFAELTPCINGFDSEVFIFKVHRPHLHRGRKL
GRVLFNDCAGRGYNIYSSTDQHFQVDVDGTVELKTQLTLHQVQEFSVHAWDSEGKRYTAS
VRVENHHHAQQEETKNMNINVLKLWRQKRRCMLIPPLAVPENQNVPFPKLIAVFKSDFAK
ENTMIYSMKGEGADEPPVGVFIIDKNNGALYVTQPLDRETKDKYVLTVHAVAANGEVEEE
TTEIIIFVIDGNDNKPIFTQNPFLGSVAEASPRDFEFMVANATDADDPDSDHADIRYSII
SQTPPQPDPNMFIINPITGGIRVNSDELDRETYPEYILLIQAADMMGDGLVTTGTAVITV
TDINDHAPQFEKTLYTASVPENKVGSVVVKIPVTDGDDPQTPAWTANFRIFSGNSGGFFS
ISTGPNKQEGIITTVKPLDFEQTNKYTLLVITENDVPFAKPLPTSTATVIVNVQDVNEAP
VFDPAETIISKPEDLEVGTELTVYTATDPDTARAQTVTYRVSNEDRSGWVSIDRDTGLIR
VKSSMDRESPLVKDGKFKVLILAVDDDEVPATGTGTLVIELEDVNDNAPVIEEREITVCS
KNSVPVSLSVTDEDGSGFAAPFTVELHEESRNNWTAGMDDSNTKILLTLKTAIQQGKYSV
VLRVYDSSLHSQDSTIITTVCDCTGEDVWCSDREISGFGLSPILGILGASLALLILVLLL
LLFLRKKRSVKKQPMIPEKTVPVPPTLKRSASFFDDNLKAADTTPQLHCSSGV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggggtttattttctgttatatggagactttaaggagagtacggctgggggttcttctc
cttctactgcaggtactctcctccagctttgctgaactgacgccgtgtataaacggattt
gattcagaggtgttcatttttaaagtgcacagacctcaccttcacagaggcaggaagctg
ggcagagttctcttcaacgactgtgctggtagagggtataacatttacagctctactgac
cagcactttcaggtggatgttgacggcacagtggaactgaagacacagctcactctacac
caagttcaagaattctcagtccatgcctgggattcagagggaaagaggtacactgcttct
gtgagagtggaaaaccatcaccatgcccagcaggaggaaactaagaacatgaatataaat
gttctgaagttgtggagacaaaagagaagatgtatgttgattccaccactcgctgtccca
gagaaccaaaatgtcccattccccaagctgatcgcagtgtttaagtcagattttgcgaag
gaaaatacgatgatctacagcatgaagggtgaaggagcagacgagcctccagtgggggtt
ttcatcattgataaaaacaatggtgcactctatgtaacgcagcctctagacagagagacc
aaagataaatatgtgcttacggttcatgctgttgcagctaatggtgaggttgaggaagaa
actacggagattatcatttttgtaattgatggaaacgataataagcccatcttcacccaa
aaccctttccttggcagtgttgcagaagcttcacctcgagattttgagttcatggtagcg
aatgctacagacgcagacgatcctgacagtgaccatgcagacatcagatactccatcatc
agccagactccaccacagccagatccaaacatgttcatcattaacccgattactggaggg
attagagtgaactctgatgaactggacagagagacttatcctgagtacatcttgctgatc
caagctgcagatatgatgggtgatggcctcgtcaccactggaacagctgttattactgta
actgatatcaacgaccacgcaccacagtttgaaaagaccttgtacactgcatcagtcccg
gagaataaagtaggatctgtggtggtgaagataccagtgactgatggagatgatcctcag
actcctgcctggacggccaacttcaggatctttagtggaaacagtggtggatttttcagc
attagcacaggacccaacaaacaggagggcatcattactactgttaagccattggacttt
gaacagaccaacaagtacactctgctggtgatcacagagaatgatgttccatttgccaaa
cccctccctacatccactgctacagtcatcgtgaatgttcaggatgtaaatgaggcgcca
gtgttcgacccagcggagaccatcatttctaaacctgaagatctggaagttggtactgaa
ctaaccgtttacaccgccactgatccagacacagcgagagctcagacagtgacataccgt
gtatctaatgaagatcgttctggctgggtgagtattgaccgagacactggactgatcaga
gtgaagagctccatggacagagaatctcctttagtgaaagatgggaaatttaaagttctg
atcttggctgtggatgatgatgaagttccagctacaggtacaggaaccctggtgatcgag
ctggaagatgtgaacgataacgctcccgttattgaagagagggagatcacagtgtgcagt
aagaactctgttccagtctcactctctgtaacagatgaggatgggtctggttttgctgct
ccgttcactgttgaactccatgaagagagcaggaataactggactgctgggatggacgac
tcaaatactaaaattctacttacgcttaagactgcaatacaacagggaaaatacagtgtg
gttctgagggtgtatgattccagcctccacagccaagacagcactatcattaccactgta
tgtgactgcactggagaggacgtctggtgctcagacagagaaatttcaggcttcggccta
tcacccatccttggaattctgggggcttcactggctttgctaattctggtcctattgcta
ctcctgttcctgaggaagaagagatcagttaagaaacagccaatgattcccgaaaaaacc
gtccccgtcccaccaaccctgaagagatcagcatccttttttgatgataacctgaaggcg
gctgatacgaccccacagctccactgctcttctggtgtttga

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