Astyanax mexicanus (Mexican tetra): 111190574
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Entry
111190574 CDS
T05042
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
111190574 (brat1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111190574 (brat1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
DUF445
RIX1
Motif
Other DBs
NCBI-GeneID:
111190574
NCBI-ProteinID:
XP_022519993
Ensembl:
ENSAMXG00000037365
LinkDB
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Position
21:4848404..4883157
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AA seq
804 aa
AA seq
DB search
MESNCSSLLSAVCEVLPNPKLLLPDDTSLEKLLDWFKDLINHNDGQYIKHYQPCLLEFLH
TMTKSEAVDSTVFSFTLKLTGLLASKEDSFNWLQERGVLLHMFDPDSWHEIELWKNASVR
GGWLQGLWNMLQYQQAVGFFCKTGLIKLLLSLQNDESFFLSSLTNQILVHVLNLVTLPVL
SSSIESDAQTRPPVSTDCRSVTAEVMSHVTRSLSSEEQAAVASGLRLLAVTVEQCRDPVK
GQLWEHALEPLEVLVNLHDDSLNLSVMAVLQAAAKSPFFTNPEYKAETLIDAMLYSKNTN
ESLQCAALILQVDSCPDHLKKKATDVIVRPLLCVTASSTIVQDGCDSLLANQLSQKASCV
PLLTQSLSSIADFVCKNSLDDVPIRSITSSVIQLLKMCIGHQPSTFLRTAASHVIGCCKI
QKYSLDVLQSLADSKESVDFLQEALTVLLLYLQCPDTHATVFKKTYQAVLKWLGVSSSSP
TVLETISHDLYPLLKKLVCDGRWEVRDSTLEFIMQLTAAFKGNPEYNEAFRNSGMISVLL
ISLSDGESYVQASAVSALGEALTDTPLCASFQEEAVTHLLSILSKDAESFPRRAVMKVFT
SWLKSPLSFTGLDNHLSSVLSLGSSDFDWEVKVQTLEIVDMLMDNSLSCSRSSQGRESMK
QPLHRLMGLGLFDLLLKCLFDCDRPVSQKACALLIKLRSVLRETDSSEHSDDLTLDISSC
SWGEEVLQRFHRKQQPEEWSSVKNGAPDSLKKIHLCEILELLELEDMQCILSLSSDHVIN
SPRSVMEDILSAAQQSELNVVDCY
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaactgctcatccttgctgtcagctgtctgtgaagtgctgcctaatccgaaa
cttctgcttcctgatgacacgtctttagagaagcttctggactggttcaaagacctgata
aatcacaatgatgggcagtatattaagcattatcaaccatgtctcctggagttcctgcac
acaatgacaaaatctgaagcagtagattctactgtcttttcattcactcttaaactcact
gggcttttggcatctaaagaggacagttttaactggcttcaggagagaggagtgttgctg
cacatgtttgatccggatagctggcatgagattgaactttggaaaaatgcctcggtacgt
ggcggttggctgcagggactgtggaacatgctgcagtaccaacaagccgtgggatttttc
tgtaaaactgggctcatcaagctgctcctctctctacaaaatgatgaaagctttttcctc
tcctctttgaccaatcagattttagtacacgttttaaatttggtcaccctgccagtgttg
agcagcagtatcgagagtgatgctcagaccaggcctcctgtcagcactgactgcagatca
gttacagcagaggtaatgagccatgtgaccaggtcattatcctcagaggagcaggcagct
gtggcctcaggtctgcggctgctggctgtaactgttgagcagtgcagagaccctgtgaag
ggacagctgtgggaacatgctctggaacctctggaagtcctggtaaacctgcatgatgac
tcattaaatctgtctgtaatggccgttcttcaggctgctgcaaagagtcctttttttact
aacccagagtataaagcggagacactgattgatgccatgttgtattcaaaaaatacaaat
gaatcattgcagtgtgcagcactaatcctacaagtggacagctgccctgaccatttaaaa
aagaaagcaacagatgtgattgtccgtcctctactgtgtgttactgcatcctctacaata
gttcaggatggttgtgattcactcttggcaaatcagttatcccagaaagcctcctgtgtc
cctctgcttactcagagtctgtccagcattgctgattttgtgtgcaagaattctttggat
gatgtccctattcgatcaatcacttcctctgtgatacaacttctgaagatgtgcattggc
catcagccctccacttttctacggactgcagcttctcatgtgattggctgctgcaaaata
cagaagtacagcttagatgttttgcagagcctcgctgattctaaagagagtgtggacttc
cttcaggaggctcttactgttcttctgctgtacctgcagtgtcctgacacacacgccaca
gtttttaagaaaacatatcaagccgttctcaaatggcttggtgtatcttcatcctcaccg
actgtactggagacaataagtcatgatctttatcctttactgaaaaagcttgtgtgtgat
ggacgatgggaagtgagagattctacgctggagtttatcatgcagctcactgctgcgttt
aaaggaaatcctgaatataatgaagcttttaggaacagtggcatgatctcagtgctgtta
atctcactgtcagatggggagagctacgtccaagcatccgcagtgtctgctctgggagag
gcgttaacggacacgccgctctgtgcgagctttcaggaggaagctgtgacacatctgctg
agcattctctctaaagatgcggagagcttccctcgtcgtgctgtgatgaaagtcttcaca
tcctggttaaaaagcccgctctctttcactggattggacaaccacctgagctcagtactg
tctctgggtagcagcgactttgactgggaggtgaaagttcagacactggagattgtggac
atgttgatggataattcactgagctgctccagatcttctcagggaagggaaagcatgaag
cagccgctccacaggctgatgggattggggctgtttgatttgctgttgaaatgcttattt
gactgcgacagacccgtctctcagaaagcctgcgctctcctgattaagctcagatcagtt
ctgagagagacagacagctctgagcacagtgatgatcttactctggacatcagcagctgt
agctggggggaggaagtgcttcagaggttccacaggaaacagcagcctgaagagtggagt
tctgtgaagaatggagctcctgactctctgaagaagatccacctgtgtgagattttagag
ttattggaactggaggacatgcagtgtattttatcactcagcagtgatcatgtgattaat
tcaccccgatctgtaatggaagatattctgtctgcggctcagcagagtgaacttaatgta
gtcgactgctattga
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