Astyanax mexicanus (Mexican tetra): 111190600
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Entry
111190600 CDS
T05042
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111190600
04121 Ubiquitin system [BR:
amex04121
]
111190600
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111190600
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111190600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
111190600
NCBI-ProteinID:
XP_022520027
Ensembl:
ENSAMXG00000041080
LinkDB
All DBs
Position
14:32190352..32192905
Genome browser
AA seq
555 aa
AA seq
DB search
MASQPSTSSTDKTTQQSLHFQKAITEKRKKEITDAIVEFIALDMRPINVVKGEGFKQLMK
KMEPGYVLPKRSSISQALSLKYSDLQDQVSAFIENSSALSLTTDIWTSLNMEAYMSVTCH
FINQEWELCNFVLATKAMEVSHTGVHIAQLLGEVAESFAIPNYKRVAVVHDNASNMKLST
ETLKKEPEKWGNVQGVFCSGHTLQLCINSALKQDRVRRTISAARNLVGHFKKSAKATIAL
KDKQKQQNVVEHSLTQDIATRWNSTCEMLDRLLEQRWPVTAVLSDPSITKKGDRTLDLST
EQWKLAQDLVEVLRPLITLTEVLSQEENVSLSSAVPMLFNLKKRHLSLEEEDETPAIREM
KKTLITEIDNRWQLLTMEPKSIYLLSSALDQRFKHLKFLQNDMRNLVYTEVVHLAEHLHQ
QQAVPGEEKEQAAGGEEEPEAPPHKKRRQQEISMLMQSDEEEEEHNESSAAKEMEQYLKD
TTKVQSGPLTWWKQNSDRYPKLAFAAKYCLCVPATSTPSERILSKAGYIVNKTRSSLLPE
NVNKLVFLAHNMKKV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcagccatcgacatcttcaaccgacaaaacgacacagcaaagcctccacttc
cagaaagcaataacagagaaaagaaagaaagagataacagatgctatagtagagttcatc
gcactagatatgagacccattaacgtagtcaaaggcgaaggcttcaaacaattaatgaaa
aagatggagcccggttacgttctccccaaacgctccagtatttcacaggccttgtctctg
aagtacagcgatctccaagatcaagtttcagcttttattgaaaactcctctgcattaagt
ttaacaacagacatttggacctcgttgaacatggaagcttacatgtcagtcacatgtcac
tttataaatcaggagtgggaactttgtaactttgtattggcaaccaaagcaatggaggtg
agccatacgggcgtccatatagcgcaactgcttggagaagtggcggagtccttcgctatt
ccaaattataagcgagtagcagttgttcacgacaacgctagcaatatgaagctgagcacg
gaaactctgaagaaggaaccagaaaaatggggcaacgttcaaggagttttctgctcagga
cacacactacagctatgcataaacagtgctctaaaacaggacagagtacgtcgcacaatt
tcggctgctaggaatctagtgggacacttcaaaaaaagtgcgaaagctacaattgcccta
aaagataaacaaaagcagcaaaatgttgttgagcacagtcttacacaagacatcgctact
cgttggaactccacatgtgaaatgcttgaccggctgttggagcaacgatggccggtgacg
gctgttttgtcagatcccagcattacgaagaaaggtgatcgcaccctggatctgtcaacc
gagcagtggaaactggcacaagatttagtagaagtacttaggcccctaatcacgctcacg
gaggtgctctcacaggaggagaacgtgtcattgtcctcagctgtgccaatgctctttaac
ctgaagaaacgccacctgtcactcgaggaggaggacgaaaccccagccatcagagaaatg
aaaaagaccctcatcacggagatcgacaaccgatggcagcttttgactatggagcccaag
agcatctacctcctttcttcagcactggaccaacgattcaaacatttaaaattccttcaa
aatgacatgaggaacctcgtctacacggaggttgtccatctggctgaacatctgcaccag
caacaggctgttccaggggaggaaaaagagcaggcagcaggaggagaagaggagcccgaa
gcaccaccacacaagaaacggagacagcaggagatttcaatgctgatgcagtctgatgaa
gaagaggaagagcacaatgaatccagtgcagcgaaagagatggagcagtatttaaaggac
acaacaaaagtccagtctggtccactcacatggtggaaacaaaacagcgaccgctacccc
aaactagctttcgcagctaaatactgcctttgcgtaccggccacatcgaccccgtcggag
cgtattctttccaaggccggctacatagttaacaagacacgaagctcacttttaccagaa
aatgtgaacaaacttgtgtttcttgcacacaacatgaagaaggtgtag
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