Astyanax mexicanus (Mexican tetra): 111190977
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Entry
111190977 CDS
T05042
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like protein 13 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
111190977
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
111190977
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111190977
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111190977
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111190977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Sema4F_C
JIP4_N
Motif
Other DBs
NCBI-GeneID:
111190977
NCBI-ProteinID:
XP_049326477
Ensembl:
ENSAMXG00000034576
LinkDB
All DBs
Position
22:13122052..13129471
Genome browser
AA seq
672 aa
AA seq
DB search
MEDRSAAERLRLRWNERLPVGAGLWNLGNTCFLNSVLQCLTYTPPLANYILSGEHSNTCF
SPESCITCSIQKHFTQVFANPGTVIIPVDMVSKLTLISEQFCLGQQEDAHEFFSYTVSAL
EQSCLNRNMLDRETEGTNLIKQIFEGCMRSRVKCLSCRAESDTFEPYMDVALDIREAEDL
TDALRQFVRSEQLDGYKCNVCMKTSPASKTFAIFRSSNVLTICLKRFNFYGDKISKFVRY
PTYLDMDPFMSDGGGSDERQTYKLYAVLVHSGSDCQIGHYYCYVKAGDSKWYKMDDSEVS
VADKQSVLSEQAYMLFYIRTTKTKAMKRSNTCGESSGIENTKRKRERSQNPDKEESPPMA
KRACKEIPATLQQRCQEENKQKIWTSETQNLERRSYRYGDGFDLGSIIFNTTQQSTEKRK
RSPSSDKEESPPMAKQARKEMPATLQQSLQEENKPKIWTSETQNLERRSYRYGDGFDLGS
IIFNTTQQSTEKRKRSPSSDKEESPPMAKQARKEMPATLQQSLQEENKPKIWTSETQNLE
RGSYRYGDGFDLGSIIFNTTQQSTEKRKRSPSSDKEESPPTAKQARKEMPATLQQSLQEE
NKPKIRTLEKHKLEERSDEDSLVYGECSGMFYTPQQSTVERKRSHSSDKDESPPGANRKH
TDTPANHQQGLQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgttctgcagcagaacgtctgcgtttgaggtggaacgaaaggctacctgtt
ggagcaggactatggaacctgggcaacacgtgctttctgaactcggttctgcagtgtctt
acttacacccctccactggcgaactacattctatcaggagagcactccaacacatgtttc
agtcctgagtcttgcatcacgtgctcaatacaaaagcactttactcaagtgtttgcaaac
ccgggcacagtcatcattccagtagacatggtttctaaacttactctgatctcagagcag
ttctgtttaggacagcaagaggatgcgcacgagtttttcagctacacagtgagcgctttg
gagcagtcctgccttaacagaaacatgctcgacagggaaacagagggaaccaacctcatt
aaacagatatttgaaggttgtatgagatctagagtgaagtgcctgagttgcagagcagag
tcagacacatttgagccttacatggatgttgcactggacatcagggaagctgaggatctt
acagatgctttaaggcaatttgttaggtctgagcaactggatggctacaagtgcaacgtg
tgtatgaaaacgagcccagcatcaaaaacctttgccatatttcgcagctcaaatgtgctt
accatctgtctcaaacgcttcaacttttatggagacaaaatttctaagtttgtgagatat
cccacatacctggacatggacccgttcatgtctgatggaggagggtctgatgagagacaa
acttacaagctgtatgctgtgctagtgcactctggatctgactgccagatcggacactac
tactgctatgtgaaggctggtgacagcaagtggtacaagatggatgattctgaggtgtcc
gtcgctgataaacaatcagtgctttcagaacaggcatacatgctgttctatatcaggact
acaaaaacaaaggcaatgaagaggagcaatacatgtggtgagagcagcggaatcgagaac
accaaaaggaaacgcgagcgctcccaaaaccctgataaagaggagtctcccccgatggct
aagcgggcatgcaaggaaatacctgcaactctccagcaacgctgtcaggaagaaaataaa
cagaaaatctggacttcagaaacacaaaacttggagagaaggagctacagatatggcgat
ggctttgacttgggcagtataatctttaacaccacacaacaaagcacagagaaacgcaag
cgcagcccgagctctgataaagaggagtctcccccgatggcaaaacaggcacgcaaagaa
atgcctgcaactctccagcaatcattgcaggaagagaataaaccgaaaatttggacttca
gaaacacaaaacttggagagaaggagctacagatatggcgatggctttgacttgggcagt
ataatctttaacaccacacaacaaagcacagagaaacgcaagcgcagcccgagctctgat
aaagaggagtctcccccgatggcaaaacaggcacgcaaagaaatgcctgcaactctccag
caatcattgcaggaagagaataaaccgaaaatttggacttcagaaacacaaaacttggag
agagggagctacagatatggcgatggctttgacttgggcagtataatctttaacaccaca
caacaaagcacagagaaacgcaagcgcagcccgagctctgataaagaggagtctcccccg
acggcaaaacaggcacgcaaagaaatgcctgcaactctccagcaatcattgcaggaagaa
aataaaccgaaaattaggactttagaaaaacacaagctggaggagaggagcgacgaggac
agcttggtttatggagagtgcagtggaatgttctacactccacagcaaagcactgtggaa
cgcaagcgcagccacagctccgataaggatgagtctccccccggcgctaatcgaaaacac
acagatacacctgcaaatcaccagcagggattgcaataa
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integrated database retrieval system
