Astyanax mexicanus (Mexican tetra): 111191991
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Entry
111191991 CDS
T05042
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03030
DNA replication
amex03410
Base excision repair
amex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111191991 (zgc:110269)
03410 Base excision repair
111191991 (zgc:110269)
03450 Non-homologous end-joining
111191991 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
111191991 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
amex03400
]
111191991 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
111191991 (zgc:110269)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
111191991 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
111191991 (zgc:110269)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
111191991 (zgc:110269)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111191991 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
111191991
NCBI-ProteinID:
XP_049332719
LinkDB
All DBs
Position
4
Genome browser
AA seq
355 aa
AA seq
DB search
MGITKLADLIRSEAPGSISHKEIGDYTGKVIALDTSIVVNQFRSAVPGLPYSPLLGLFYR
TLTFLEHDIKPVFVFDGKPPNQKRAVLEKRAQSAGWNSSYRSNTVSTKTQEFLRLVQLMG
MPFIMAPADGEALCAHLVRGGVVDAVASEDMDTLAFGGTTLLRQLNAKRDSEVTEYSLPK
LLETLQLTQEEFVDLCILLGCDYCDKITGLGPSRALKLIQQHRTIEHVKQNVNKKTHPVP
LAWQYQAARRLFLEPPQADTPDLAWSDPDEEGLVKFLCVEKNLKEEKVRGRMEKYRQTLS
KRRKEREEAKKEGRTRQSRMEEFFRVTRKRPSADTALSSSSSGSGSKSVKKAKRK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcactaaactggcagatttaattcggagtgaagctcctggttctatttctcac
aaggaaatcggagattacaccggaaaggttatcgctctcgatacttccattgttgtgaac
cagtttcgctcagctgtgcccggtctgccatacagtcctctactcggcctgttctaccgc
acccttactttccttgaacatgacatcaagccggtcttcgtgtttgacgggaagccgccc
aatcagaagagagctgtgctggagaaaagagctcagagcgccggctggaacagctcctat
cgctccaacaccgtgtccaccaaaacccaggaattcctccgtctcgtgcagctgatggga
atgccctttatcatggctcctgcagatggtgaggcgctgtgtgctcacctggtcagaggt
ggggtggtggacgctgtggcctctgaggacatggacacgctggcgttcggaggtaccacc
cttctacgccagctcaacgccaagagagacagtgaggtcacagaatactccttaccaaaa
ctactggaaactttgcagctcacacaggaagagtttgtagatctgtgtatattactgggc
tgtgattactgtgataagataacaggactgggtccaagccgagccctgaagctgatccaa
cagcacagaaccatagagcatgtgaagcagaacgtcaacaaaaagactcacccggttcct
ttagcctggcagtaccaggctgcccgcaggctgtttttggagccacctcaggctgatacc
cctgatctggcctggagtgatccagatgaggaaggcctggtgaagttcctgtgtgtggag
aaaaacttaaaggaggagaaggttcgaggaagaatggagaagtatcgtcagactcttagc
aaacggaggaaagaaagggaggaggcgaagaaagaaggaagaaccagacagtcacgtatg
gaggaattctttcgagtgacacgaaagagaccgtctgcagataccgcgctgtcaagttcc
agctccggctccggttccaaatcggtaaagaaagcaaagaggaaataa
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