Astyanax mexicanus (Mexican tetra): 111192506
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Entry
111192506 CDS
T05042
Symbol
gatad2ab
Name
(RefSeq) GATA zinc finger domain containing 2Ab isoform X1
KO
K23194
transcriptional repressor p66
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111192506 (gatad2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111192506 (gatad2ab)
03036 Chromosome and associated proteins [BR:
amex03036
]
111192506 (gatad2ab)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111192506 (gatad2ab)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
111192506 (gatad2ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
DUF7573
ZZ
Zn_ribbon_8
SorCS_stalk
Motif
Other DBs
NCBI-GeneID:
111192506
NCBI-ProteinID:
XP_022525322
Ensembl:
ENSAMXG00000035363
LinkDB
All DBs
Position
16
Genome browser
AA seq
635 aa
AA seq
DB search
MSEEVVRQTRSQKRALERETPAALDGDTKRVKVERGELGSGKVASILNAGEVKATIKVEV
QACDEPVDMSTSKSEVKKERPPTPDDVIVLSDNEPSSPCMNGISHTIKKADTEMLMKSSP
EERQSIIKQLKEELRVQEAKLVLLKKLRQSQIQKESVVQKTANSTANPPPLVRGSISSSK
GPLQVSSNRSSGTVIPPPLVRGGAQASKHGSIVMPPLVRGSQQIATLRQQQQQQHSGSGP
PPLLLGPRTSVPNVQVQGQRIIQQGLIRVANVANTNVLVNIPQGSPTALKGSSSQSGIST
NASAVNANDSPASRQAAAKLALRKQLEKTLLEIPPPKPPAPELNFLPSAANNEFIYLVGL
EMVVQNLLDLAKSKQQAQQGTSAKDPYTCAQCQTDFTSRWRQEKGNNTILCEQCMSSNQK
KALKAEHTNRLKAAFVKALQQEQEIEQRILQQAASPSPKTSSSSSSSSSPVVKSEQHVLV
SQHYKTARASLPQQASRAVTANRYHSGTIKQSPGQLSRSMQQAVVSASSRGLSHGFSTSS
QLQNAVTAAALVSRPGKHAVRAGSKGNSGSSSSSSNPAASAWRKQNSSITGVTMAYVNPS
LSVHKTTSPVDRQREYLLDMIPSRSISQTTNTWKQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggtggtgcgtcagactcgcagccaaaagagggccctggaacgggagact
cctgctgccctggatggagacactaagagagtaaaggtggagaggggagagcttgggtca
ggaaaagttgccagcatcctgaatgctggcgaagtgaaggccaccattaaagtggaagta
caagcatgcgatgaacctgtggacatgagcacatccaagagtgaagtgaagaaggaaagg
ccaccgacgccggatgatgtaatcgttttgtctgacaacgagccctccagtccgtgtatg
aacgggattagccacaccatcaagaaagcagacacagaaatgctgatgaagagcagtcct
gaggagcgccagagcattatcaagcagctgaaggaggagctgcgtgtgcaggaggccaag
ctggtcctgctgaagaagctgcgacagagccagatccagaaagagagtgtggtgcagaag
acggcgaattcaacagccaaccctccacctctagtaagaggcagcatctcatccagcaaa
ggacccctacaggtgtcgtctaatcgaagctcaggcacagtcatccctcctcctctggtc
cgagggggagcgcaggcttccaaacatggctctatagtgatgccacccttagtcagagga
tcacagcagatagccacactgcggcagcaacagcagcagcaacactctggctcaggacct
cctcccctgctgctgggccctcgcacatctgtgcccaacgtccaggtgcagggccagagg
atcatccagcaaggcttgatccgggtggctaatgtagccaacaccaacgtcctggtcaac
atcccacagggttcacctactgccttgaagggctcttcttcccagtcaggcattagcacc
aacgcctccgcagtcaacgccaatgactctccggccagccgacaagctgctgccaagctg
gccctgaggaagcagctcgagaagaccctgttggagattcctcctccaaaaccccctgca
ccagagctcaatttcctgccctctgctgccaacaatgagttcatctacctagtggggctg
gagatggtggtgcagaaccttttggatttggccaagagcaaacagcaggcacagcagggc
acctctgcgaaggacccatacacgtgtgcacagtgccagacagacttcacctcacgctgg
aggcaggagaagggcaacaacaccatcctgtgtgagcagtgcatgagctccaaccagaag
aaagccctaaaggcagaacacaccaaccgactaaaggctgccttcgtcaaggccctgcag
caagagcaggagatcgagcagcgcatccttcagcaggctgcttcgcccagccccaagacc
tcttcgtcctcctcatcctcatcctcaccagtagtgaagtctgaacagcatgtgctggtg
tcgcaacattataaaacagctcgtgcctctctgccccagcaagccagcagggcggtgacg
gccaaccgctaccactccggcaccatcaagcagagtccaggccagctgtcgcggagcatg
cagcaggcagtggtcagtgcgagctcccgcggcctgagtcacggcttctccacgtcctct
cagctgcagaatgctgtcacagccgctgcgctggtcagcagaccaggtaagcatgccgtg
agggcggggtcaaaaggcaacagcggcagtagcagcagcagcagtaaccccgccgccagt
gcatggaggaagcagaacagcagcatcacaggtgtcaccatggcctatgtcaaccccagc
ctgtctgtacacaagacgacctctccagtggaccgccagcgagagtaccttctggacatg
atcccctcacgctcgatctctcagacaacaaacacatggaaacaataa
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integrated database retrieval system
