Astyanax mexicanus (Mexican tetra): 111192950
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Entry
111192950 CDS
T05042
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
111192950 (trpc2a)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111192950 (trpc2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
111192950
NCBI-ProteinID:
XP_049323397
Ensembl:
ENSAMXG00000011913
LinkDB
All DBs
Position
18:28649313..28667526
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AA seq
826 aa
AA seq
DB search
MVLDELESRVKQWGEIINRKIHFPPELIIAIQESNMVMVKSLLCAEEGFIHQLVDSEERQ
WREALNLSIRMGSEETMAALLRGIKFDFRQIHEALLVAVDTNQPRVVKLLLDRLDQEKGN
KIDVRSFSTAIFDRSIDASQFAPGVTPLTLACQEDLYEIVTMLTQRGHIISPPHAISCSC
LECRNARQYDLLKFSLSRINTYRGIASRAYLSITSEDAILSAFHLSSEMRKLSKKEPEFK
PQYLALEQVCQEYAVELLGMCRNQSEVSTLLNYGEDVSDEELDEQTFEEGIPNLALIRLA
ITYNQKQFVTHPICQQVLSSIWCGSLSGWRGSNTSWKLLVSLGIFVSMPLLCFIYWIAPK
SKIGRTLKIPVIKFLLHSASYLWFLIILLTESIFMEIWRDDIASRSQNLLHNSLHMIWVV
GFFWFECKEVWIEGLKTYLLDWWNILDMLVLSMYLASFTLRILIVLKGHFLCQDPSAEDL
CDYFTNTARENWRQEDPQLIAEMLFAVTSMLSFTRLAYILPAHEFLGTLQISIGKMIDDM
MRFVFILMIIGTAFLCGMHNIYAPYVSSPLGRLNETFNFLFWTMFGVFNQEKVDMPDHVM
AEFVGRVLYGIFTLIIVIVLLNMLIAMITNSFQKIENDADVEWKFARSKLYLSFFREGLT
MPVPFNIIPSPKALFYGIRYANSGVQNTLSSLKLSGSTLNQSEGQGEGRVPYRLQVIKVL
VQRYIAAARQEFEDTKNNDVGHRITELNKVVGRLDIEVMKVDENLHCRRGASRPERETSA
ILNDYIMRAKNHFHNFDKKEASGSRGAGLQVLFHHSEEQKEKKESR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggttttggacgagttggagagcagagtgaagcagtggggagagatcatcaacaggaag
atccactttcctcctgagctgatcatagccatccaggagagcaacatggtgatggtgaaa
agcctgctctgtgcagaggagggctttattcaccagctggtggattctgaggaacgccag
tggagggaggctctgaacctctccatcagaatgggcagcgaggagaccatggctgcgctt
ctgaggggcatcaagttcgatttccggcagatccacgaagccctgctggtggcggtggat
actaatcaaccaagggtggtcaagcttcttctggaccgcctggaccaggagaaaggtaat
aaaatagacgtacgctccttctccaccgccatctttgaccgctccatcgacgcctcgcag
tttgcccctggagtgacccctctcacgctggcctgtcaggaagatttgtacgagatcgtg
accatgctcactcagagaggccacatcatctccccacctcacgccatctcctgcagctgt
ttggaatgcaggaacgctcggcagtacgacctgctcaagttctcactctctcgcatcaac
acgtaccgaggcatcgccagccgcgcatacctgtcaatcacctccgaggatgccatcctc
agtgccttccacctgagctccgagatgcgcaagctgtccaagaaggagccggaatttaaa
ccgcagtacctggctctggagcaggtgtgtcaggagtacgctgtggagctgctgggaatg
tgccggaaccagagcgaggtctccactctgctgaactatggtgaagatgtcagtgatgag
gagctagatgagcagacgtttgaggagggtatacccaacctggcacttatccgtctggct
ataacctacaaccaaaaacagtttgtgactcatcccatctgccagcaagtgctgtcctcc
atttggtgtggcagtctctcaggctggaggggcagcaacacatcgtggaaactgctggtg
tctctggggatctttgtgagcatgccattgctgtgcttcatctactggattgctccaaaa
tccaagatcggcaggactctgaagattccagtgatcaagtttttgctgcactctgcttcc
tacctgtggttcctgattatcctgctaacggagtcaatcttcatggaaatctggcgagat
gacattgcttcccgctcacaaaaccttctccacaactctcttcacatgatctgggttgtt
ggtttcttctggtttgagtgtaaggaggtgtggattgagggactgaaaacctacttactg
gactggtggaacattctggatatgctggtgctcagcatgtacctggcctccttcacactg
cgcattttaattgtgctaaaaggccatttcctgtgccaagatcccagcgctgaagacctg
tgtgactacttcacaaacacagcacgagaaaactggagacaagaagaccctcagctgatt
gctgaaatgctatttgctgtgaccagcatgctgagcttcacacgtctggcctacatccta
ccagctcacgaattcctgggaaccctacagatatccattggtaaaatgatcgatgatatg
atgagatttgtttttatcctgatgatcatcggcactgctttcctgtgtgggatgcacaac
atatacgctccatatgtcagctctccacttggcaggcttaatgagacctttaactttctc
ttctggactatgtttggagtgttcaatcaggaaaaagtggacatgccagaccacgttatg
gcggagtttgtgggcagagttctttacgggattttcactctgatcatcgtcattgtgctg
ctcaacatgctcatcgccatgataaccaattcatttcaaaagattgagaatgatgccgac
gttgaatggaagtttgcgcgttccaagctctacctcagctttttcagagagggcctcacc
atgcctgttcctttcaatatcattccttcccccaaggcattattctatggaataaggtat
gcaaattcaggagtgcaaaatactttgagctcacttaaactttctggcagtaccctgaac
cagagtgaaggtcagggtgaaggcagagtgccatatcgcctgcaggttatcaaggtttta
gtgcagcgctacatcgcagcagcacgtcaagagtttgaggacaccaagaacaacgatgtg
ggccacagaatcacagaactgaataaagtggtgggaagactggacatagaggtgatgaag
gtggatgagaatctccactgcagacgtggagcatccagaccagagcgtgagaccagtgcc
attctgaacgactacatcatgagggccaagaaccatttccacaactttgataagaaagag
gcttcaggaagccgaggtgctggactgcaggttctgttccaccacagtgaagaacagaag
gaaaaaaaagaaagcagataa
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