KEGG   Astyanax mexicanus (Mexican tetra): 111195789
Entry
111195789         CDS       T05042                                 
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    111195789 (dcaf11)
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111195789 (dcaf11)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st WDR55 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 ASA1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_NOL10_N DSE1_N Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 WDR90_beta-prop_4th Cytochrom_D1 PAC11 Beta-prop_DCAF12 PROPPIN Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_LRRK2 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 111195789
NCBI-ProteinID: XP_022539773
Ensembl: ENSAMXG00000000519
UniProt: A0A3B1K9R1
LinkDB
Position
1
AA seq 545 aa
MGSQSSSGMSGRGSSGNPDQSEPESNQNSNQRGRRQPERQADRASASEEDVDLAQVLAYL
LRRGQVRLVHGSGATGLQLVQSVSDSDEDSDGAWEGRLGHRYDPPVDSHPDTQEVDRSEI
RTQILLATASSNLKGKHSFTHMLNQREQGRCRGSSFSHGECSRIRSHFLPNFVAHKDTYH
QKAFCGVYSDDGNMFLSACQDQNIRLYDTSRGGFTLVRTVKARDVGWSVLDVCFTPGSRS
VLYSSWSDYIHVCSIDGESETHTALDLNPDERRFCVFSLAASIDGKEILGGANDGCLYVF
DREQNKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDAVCKVWDRRTLREDRPQPVGQLA
GHRDGITFIHSKGDARYLISNSKDQTIKLWDIRKFSPKEGLAASRLAVTQQNWDYRWQQV
PQRALKKHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFSTGQRFIYTGCSTGRIIIYDVLT
GRVVSKLSGHDACVRDVSWHPFQDNIISSSWDGAVRLWEHRQTHPLDEESDRAQERMRVR
EERKE
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgggctctcagtccagttctgggatgtccggtcggggctccagcggcaacccagaccag
tcagaaccagaatctaaccagaattccaaccagagaggccgccggcagcccgagaggcag
gcagacagagcatcagcgtccgaggaggacgttgatttagcacaagtactggcgtaccta
ctgagaaggggccaggtcagactggtccatgggagtggagcaacaggactgcagctcgtc
cagtctgtctcagactctgatgaggacagtgatggagcctgggagggacgtctgggacac
cgttatgatcctccggtggactcccatccggatactcaggaagtggatcgcagtgagatc
cgaacacagatcctgctggccactgcctcctcaaatctgaaggggaaacacagctttaca
cacatgctgaatcagagggagcagggtcggtgtcgtggatccagtttctctcatggcgag
tgcagtcggatacgctcacattttctgcccaattttgtggctcataaggacacgtaccat
cagaaagctttctgtggagtctacagtgacgatggaaatatgttcctttcagcatgtcaa
gatcagaatatcaggctgtacgacaccagcagaggtggctttacactggtgcgcacggtg
aaagcgagggatgtgggctggagtgtgctggatgtgtgtttcactccaggctcacgatct
gtactctactccagttggtctgactacattcatgtctgcagtatagatggtgaaagtgaa
acgcacaccgctctggacctcaatccagatgaacggaggttctgtgtgttttcactggcg
gcatccatagatggcaaagaaattctgggcggagcgaatgacggatgcctgtatgtgttt
gatcgtgaacagaataaaagaactctaaagattgatgctcatgaggacgatgtaaatgca
gttgcgtttgcagacagttcgtctcagctgctgttttcaggcagtgatgatgctgtgtgt
aaagtgtgggacagacgcacgctaagggaggacagaccacagcctgttggtcaactcgca
ggacacagagatggaattacctttatacacagcaagggtgatgcacggtatctgatcagt
aactctaaagatcaaacaattaagctgtgggacatcaggaagttctcacctaaagagggt
cttgctgcctcgcggctcgctgtaacccagcagaactgggactaccgttggcagcaggtt
cctcagagagctctaaagaaacataagctgacaggagacacgtcagtgatgacctacaga
ggtcacggagtgctgcacacgctcatccgctgccgtttctctcctgagttcagtacgggt
cagaggttcatctacacgggttgttccactggcaggatcatcatatatgatgtgctgact
ggccgtgtggtgtccaaactgtcaggtcatgatgcgtgtgtgagggatgtcagttggcac
ccatttcaggacaacataatcagcagctcttgggatggagcagttcgactgtgggaacac
aggcagacccacccgctggatgaagagagcgatcgagcacaggagcggatgagagtgaga
gaggagaggaaggagtga

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