Astyanax mexicanus (Mexican tetra): 111195987
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Entry
111195987 CDS
T05042
Symbol
six4a
Name
(RefSeq) homeobox protein SIX4a
KO
K15615
homeobox protein SIX4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111195987 (six4a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
111195987 (six4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
111195987
NCBI-ProteinID:
XP_022540493
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All DBs
Position
7:9689168..9699069
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AA seq
815 aa
AA seq
DB search
MQRGQKQVQNRHQKRGEQQEGRQWQQQGNLEGQQQRQLWGQQKQGQDGQQQVQQCHPGHQ
QDQKEQVQVGQVHQQESNGQQGKQCQQGHQHEPVGQPCKQGHQQEQKGHQWQQEHQWNRK
GQEHKQRPKGQQEQQQGQQQWQEEQQWKKQDQKGQKQGQVWHQQKQEGERCYHKELEGQQ
GHPQVQDGQQWQQEHHQQQCKQGYQQEQKEHQCQEEQVGQEHRKEGQQEQQQGQKGQPWK
KQSQKGLKQGQVGHQGRKGHKYKLRQQEQQCPEGQMQEQPGKQLQQGHEWQQEQHKGQQP
RAPLPPLLMSSLSPEQAACVCEALLQSGRVTRLVSFVRALPLQPRAPESVLRARALVAFH
QACYPELYALLERHSFSPASHRTLQDLWFRARYREAESARGRPLGAVDRFRVRRRFPPPR
TIWDGERTLYCFRERSRRALRDAFACNRYPSAREKRELAEGTGLSETQVSNWFKNRRQRE
RRPREQQSRSESDGNPSSEDDSSKGPEGLSPLSSSTERTINHKVAEVILQPLEGSRTSES
PTLLIFRGSVDVCNTNHHSSASTHNQSSGNFFNELDLELQSEACRPRPDIQTDTTKADED
HPSFHISLDEPKLDLSRLDSGLMVQTEAPGSGLTHSPECSSDQSQTVSHSLVPEAEMVEA
SDETSVFKLLDLNPPSSSSPASITQGAVSTDASLTPLQSRIALYKLNRTEALTPIKQECE
STLGYMYTHLSYTHTPLPVQSGCGSAPPQLITQTDIKKLRNQDPILTPGPNSYFLCAVSE
ERTLGDTMGDTLRDECVQVGVAQEETYPNHNLTDL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggggtcaaaaacaggtgcagaataggcatcagaagcgaggagaacagcaggag
gggcgacagtggcagcagcaggggaatctggaggggcaacaacaaaggcaactatggggg
caacagaagcaggggcaagatgggcagcagcaagtgcaacagtgccatccagggcatcaa
caagatcagaaggagcaagtgcaggtggggcaagtgcatcagcaagagtcgaatgggcaa
cagggcaaacagtgtcaacaggggcatcagcacgagccagtggggcaaccgtgtaaacag
gggcatcaacaagagcagaaagggcatcagtggcaacaagagcatcagtggaatagaaag
gggcaagagcacaaacagaggccaaaagggcagcaagagcagcaacaggggcaacaacag
tggcaggaagagcaacaatggaaaaagcaagaccagaaggggcaaaaacaggggcaagtg
tggcatcagcaaaagcaggaaggggaacgatgttatcataaagagctagagggacaacag
gggcatccgcaagtgcaggatgggcaacagtggcaacaggagcatcatcaacagcagtgt
aaacaggggtatcaacaagagcagaaagagcatcaatgtcaagaggagcaagtagggcaa
gaacacaggaaagaggggcagcaggagcagcaacaggggcagaaagggcaaccgtggaaa
aagcaaagtcagaaggggttaaaacaggggcaagtagggcaccaggggaggaaggggcat
aagtacaagctcaggcaacaggagcaacagtgcccggaggggcaaatgcaggagcaaccg
gggaaacaactgcaacaggggcatgagtggcagcaggaacaacacaaggggcagcagcct
cgtgccccgttgccccccttgctgatgtcctccctctccccggagcaggccgcgtgcgtg
tgcgaggcgctgctccagagcggtcgcgtgacccgcctggtcagtttcgtgcgcgcgctg
cctctccagccgcgcgcccccgagagcgtcctgagggcgcgcgcgctcgtggcgttccac
caggcgtgctaccccgagctctacgcgctactggagcgccacagcttcagtcccgcgagc
caccgcacgctgcaggacctgtggttccgcgcgcgctaccgggaagcggagagcgcgcgc
ggccggccgctaggtgccgtggaccggttccgcgtgcgcaggagattcccgccgccgcgc
accatctgggacggcgagcgcacgctttactgcttccgcgagagaagcaggcgcgcgctg
cgggacgcgttcgcgtgcaaccgctacccgagcgcgcgcgagaagcgagagttggcggag
ggcacgggcctgagcgagacgcaggtgagcaactggttcaagaacagaagacaaagagag
aggagaccccgcgagcagcagagcaggagtgagtctgatggtaacccctccagtgaagat
gacagcagtaaaggtccggagggtctctctcctctctccagctctacagaacggacaata
aaccataaggtcgcagaggtcatccttcagccactggagggcagtagaacctcagaatct
cccactttgctcatcttcaggggaagtgtggatgtctgtaatactaaccaccacagttca
gcttccacacacaaccagtcttcaggaaacttcttcaacgagctggacctggagcttcaa
tctgaggcctgcaggcctcgcccagacatccagacagacactactaaagcagatgaagat
caccccagctttcacatcagtctggacgagcctaaactggacctgagcagattagactca
ggcctgatggtccagactgaagctccaggctcaggtttaacccacagtccagagtgttcc
tcagaccagagccaaactgtaagccacagcctggtgcctgaagctgaaatggttgaggca
agtgatgaaacttcagtgttcaaacttttagatctgaacccaccttcatcttcatcacct
gcttcaattacacaaggtgctgttagcacagacgctagcctgacgccactgcagtccaga
attgccttgtataaactaaacagaactgaagcactgaccccgatcaaacaagaatgtgag
agtacactgggctacatgtacacacacctgagctacacacacacacctttacctgtacag
tcaggatgcgggtcagctcctccacagctcatcacacagacagacataaagaagctcaga
aatcaggaccccatcctgacccctggccctaatagttactttctgtgtgctgtatcagaa
gaaaggacgttgggggacacaatgggggacactctgagggatgagtgtgtgcaggtgggt
gtagctcaggaggaaacttacccgaaccacaacctgactgacctctga
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integrated database retrieval system