Astyanax mexicanus (Mexican tetra): 111197344
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Entry
111197344 CDS
T05042
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111197344
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
ZYG-11_interact
DUF7605
FxsA
Motif
Other DBs
NCBI-GeneID:
111197344
NCBI-ProteinID:
XP_022542413
Ensembl:
ENSAMXG00000000132
LinkDB
All DBs
Position
11:complement(49390294..49401359)
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AA seq
626 aa
AA seq
DB search
MESKMAGAMEKPECLISSDSEGKLCVQKKAKEILDGISNPVVVVSVVGLYRTGKSYLMNR
LAGKQEGFALGSTIESETKGIWMWCVPHPNKPDHTLVLLDTEGLGDVHKGNEKHDTWIFC
LAVLLSSTLVYNSLGVIDNMALEKLHYVTKLTEKIKVKAHMNDDYDDSAEFMRIFPSFIW
AVRDFTLELKRGDQTITADEYLEGALKLKKGNTAYVENFNLPRRFLRHFFAERRCFVFPR
PADVPDLKNMEKLPEEKLDPLFLQQSKEFCKHVHSSAKPKTVPGGRTVIGSVLGGLAEVY
VEAIRRGDVPCLENAVETLAQIQNEKAVEQTQEVYMKEVLKSIRLPMDPAELSRIHRETE
QKAVKFFISMSFNDTKQEAQLKLMGKIQAKYEDLCYQNQVVCLEVCREELNRVFAPLEEG
LRDNSFIKKGGYKKYRDTLRRLTAEYREITHTQHTCEEVLTEYLKKKEEYGNMILAADLG
LTEADREQEVIQLKREAGEQMQKVLEEQIRLQEQALSDQERTYEENVTRLLERMERERER
AQEDNKRVLEAKLKEQEALIQEGFDEKAEQMKKEIKGLKEEMENKSRSKQSTFSKVVETF
GTACLFIPGIASKVVGIGATLLSKFL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaagatggccggggccatggagaagccggagtgtctgatcagcagcgactct
gagggaaaactgtgtgttcagaaaaaagctaaagagattctggatggtatatctaatcca
gtggtggtggtgtctgtggtgggactctaccgcactgggaagtcttaccttatgaaccgc
ctggcaggaaagcaggaaggttttgctctgggcagtactatcgagtctgagactaagggt
atctggatgtggtgtgttccacaccccaataaaccagatcacactctggtgctgctggac
actgagggactgggggacgtgcacaagggtaatgaaaagcatgacacctggatcttctgt
ctggcggttctgcttagtagcactctggtctataacagcctaggagtcatagacaacatg
gcactggagaagctacactatgtgacgaaactgactgagaaaattaaggtaaaggcacat
atgaatgatgattatgacgactccgctgagttcatgcgcattttcccctcttttatctgg
gctgtgagggatttcacacttgagctgaaaagaggagaccagaccatcacagctgacgaa
tacctggaaggtgctttaaaacttaaaaaaggtaatactgcttatgttgaaaacttcaac
ctgcccaggcgttttttgcgccactttttcgctgagcggcggtgttttgttttcccacgg
ccggctgatgtccctgacctgaagaacatggagaaactgcctgaggagaagcttgaccca
ctatttctccagcagtccaaagagttttgtaaacacgtccacagcagcgccaaacccaaa
actgtcccaggagggcgcaccgtcatcggcagcgttctgggtggtcttgctgaggtctac
gtggaggccattcgtaggggtgatgttccgtgtctggagaacgcagtggagaccctggcc
cagattcagaatgagaaggcggtggaacagacccaggaggtctatatgaaggaggttctg
aagtctatccggttaccaatggacccggccgagctttcccgcatccacagagaaacagag
caaaaggcggtcaaattcttcatcagcatgtccttcaacgacaccaagcaggaagcacag
ctgaagctcatgggtaaaatccaggctaagtatgaggatctgtgttatcagaaccaggtt
gtgtgtttggaagtgtgtcgtgaggagctgaacagggtgtttgctcctctggaggaaggt
ctgagagataactccttcattaagaaaggaggatacaagaagtatcgggacacactccgg
cgcctcactgcggagtacagagagatcacacacacacaacacacttgtgaagaagtgttg
actgagtatctgaagaaaaaggaagagtatgggaatatgattctagcagcggatctgggt
ctcactgaagcagatagggagcaagaagtgatacagctgaagagagaggctggtgaacaa
atgcagaaggttctagaagaacagatccggctgcaggagcaggcgctcagtgaccaggag
agaacctacgaggaaaacgtgactcgtctgctggagagaatggagagggagagagaaaga
gcacaggaggataataaacgagtgctagaagccaaactaaaggagcaggaggctctgatc
caggagggctttgatgagaaagctgaacagatgaagaaggagattaaaggtctaaaagag
gagatggagaacaagagcaggtcaaagcagtctaccttcagtaaggtggtggaaaccttt
ggcacggcatgcctcttcatacctggaatcgcctctaaagtcgttggtattggtgccaca
ttactttctaaatttctgtga
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