Astyanax mexicanus (Mexican tetra): 111197360
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Entry
111197360 CDS
T05042
Name
(RefSeq) gastrula zinc finger protein XlCGF49.1-like
KO
K09191
general transcription factor IIIA
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111197360
03021 Transcription machinery [BR:
amex03021
]
111197360
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111197360
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
111197360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_15
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_ZN142
zf-C2H2_11
Zn_ribbon_SprT
zf-C2H2_DHX34
Zn_ribbon_8
zf_UBZ
zf-LYAR
Phage_zn_bind_3
DUF7128
BHD_1
DUF5830
zf-C2H2_6
Zf-C2H2_ZNF451
zf-UBR
FYVE
zf-C2HC_2
C1_4
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
111197360
NCBI-ProteinID:
XP_049334269
LinkDB
All DBs
Position
4:18635864..18644466
Genome browser
AA seq
233 aa
AA seq
DB search
MEKHQHSVKSFTKQSDLKNHQRIHTGEKSYHCSDCGKSFTTPSALKTHQRIHSGEKPYYC
SDCGKSFTQQSTLQIHQRIHTGEKPYYCSDCGKSFTTQSNLKTHQRIHTGEKPYHCSDCG
KSFSRQSNLKNHQRIHTGEKPYYCSDCGKSFTEQSTLKIHQRIHTGVKPYYCLECEKCFS
TESHLKYHQRIHSGEKPYHCSDCGKSFNHQSRLKKHQRIHTGEKTIPNLFHSN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacatcagcactctgtcaagagttttactaaacagagtgatctcaaaaatcac
cagcgcattcacacaggagagaaatcatatcactgctcagactgtgggaagagttttact
acaccgagtgctctcaaaacacaccagcgcattcactcaggagagaaaccatattactgc
tcagactgtgggaagagttttactcaacagagtactctccaaatacaccagcgcattcac
acaggagagaaaccatattactgctcagactgtgggaagagttttactacacagagtaat
ctcaaaacacaccagcgcattcacacaggagagaaaccgtatcactgctcagactgtggg
aagagttttagtcgacagagtaatctcaaaaatcaccagcgcattcacacaggagagaaa
ccgtattactgctcagactgtgggaaaagttttactgaacagagtactctcaaaatacac
cagcgcattcacacaggagtaaaaccatattactgcttagagtgtgagaagtgtttttct
acagagagtcatctcaaatatcaccagcgcattcactcaggagagaaaccgtatcactgc
tcagactgtgggaagagttttaatcatcagagtcgtctcaaaaaacaccagcgcattcac
acaggagagaaaacaatcccaaatctgttccacagcaattaa
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