Astyanax mexicanus (Mexican tetra): 111197554
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Entry
111197554 CDS
T05042
Symbol
gabpb1
Name
(RefSeq) GA-binding protein subunit beta-1
KO
K09454
GA-binding protein transcription factor, beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
111197554 (gabpb1)
03029 Mitochondrial biogenesis [BR:
amex03029
]
111197554 (gabpb1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111197554 (gabpb1)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
111197554 (gabpb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
DUF4230
Motif
Other DBs
NCBI-GeneID:
111197554
NCBI-ProteinID:
XP_022542723
Ensembl:
ENSAMXG00000039169
LinkDB
All DBs
Position
9:44759404..44789632
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AA seq
360 aa
AA seq
DB search
MSLVDLGKKLLEAARSGQDDEVRILMANGAPFTTDWLGTSPLHLSAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHARIVEVLLQHGADVNAKDMLKMTALHWAAEHGHRDVV
ELLLRFGVDVHAQSKFCKSALDIALDNNNEELAEILQVAMQNQINTNPESPDMLTIHTAS
PQFIIGPGGVVNLAGLISPGNTAKSAVMATEEVVAADSVDGAIQQVVSSGGQQVITIVTD
GIQLGNLQTSGGIGQPIIVTMPDGQQVLTVPATDIAEETVVSEEPSLKRSRVELEEDEEE
ETHVAQTQEIKEKVALLKQLEEANREAQKYRQQFLKKEQEAEAYRQKLEAITRQGGKKTA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagtggacctggggaagaagctgctggaggcagcacgctccgggcaggacgat
gaagttcggatcctcatggccaatggtgcgccattcaccacagactggttgggaacatca
cctctgcacctgtcggctcagtacggtcattactccaccactgaggtgctcctgcgtgca
ggcgtcagccgcgacgctcggacaaaagtggaccgaaccccactacacatggcggcatca
gagggccacgcccgcatcgtggaggtgctgctacaacatggagcagatgttaacgctaaa
gacatgctgaagatgaccgctctgcactgggcggcggagcacggtcaccgggacgtggtg
gagctgcttctacgctttggtgtagacgtccacgcccagagcaagttttgcaaatctgcc
ctggacatagcactagacaacaacaacgaggaacttgctgagatactgcaggtggccatg
cagaatcagataaacactaatccagagagtccagacatgctgaccattcacacagcttca
ccacagttcatcattggccctggaggagtcgttaacctggctggactcatctctcctggc
aacacggccaaatctgcagtaatggccacagaggaagtagttgctgcagactctgtcgac
ggtgccattcagcaagtcgtcagctctggaggtcagcaggtcatcactatagtaactgac
ggcattcagctgggcaacctgcaaaccagtgggggcatcggccagcccatcatcgtcacc
atgcctgacggacagcaagtactgacagttccagctacagatatcgcagaagaaacagtg
gtgagcgaggaaccatctcttaaacggtcgcgagtggaactggaggaagatgaggaggag
gagacccacgttgcacaaacacaggagataaaggagaaggtggcgctgttgaagcagttg
gaggaagcaaacagagaagcgcagaaatatcgccagcagttcctgaagaaagagcaggag
gccgaggcgtaccgacagaaactggaggccatcacacgccaaggagggaaaaaaacagca
tga
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