Astyanax mexicanus (Mexican tetra): 125780400
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Entry
125780400 CDS
T05042
Name
(RefSeq) protein SOGA3-like
KO
K27704
microtubule cross-linking factor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
125780400
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125780400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
YabA
APG6_N
TolA_bind_tri
Fez1
KxDL
bZIP_2
TSC22
TACC_C
Acb2_Tad1_hairpin
Motif
Other DBs
NCBI-GeneID:
125780400
NCBI-ProteinID:
XP_022533243
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Position
13:complement(22267312..22278957)
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AA seq
641 aa
AA seq
DB search
MQEEETAAAAEASSPASRQDEALLQDELDRLQDENDELKAEIEEMRMEMDEMRDTFFEED
TCQLEEVRRELERANKNCRILQYRLRKAERRRMRYAQTGEVDEDVLRSLEQDLKVAKDVS
VRLHHELENVEEKRTKTEEENEKLRQKLIEVEITKQTLQNELEKNKESQKRRGSKDAQKS
ERKLAQTPNEDDNEDLKCQISFIKEEATLMRKKMATIDKEKDRMEQELQKYRSFYGDLDS
PHPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVENRGLRAELDNLRGDESSP
EGAPGGARGGAREQGAELSELRQQLQLVEDEAELLRRNLADVEEQNRRVTGELNKLRFKE
GWRHGSGSASGGGASAAEGLAEGGKSEALQEELKAARLQINDLSGKVMQLQYENRVLLSN
MQRYEVTTAHLDSDAESEGAGGAGGAGGGDRGGRRGSDDDSSSSRLPPHRKREGPVGGES
DSEEVRNSASRCQPLYTDAGRFLPRSLRERQQMMDVRAEAERLGRTIDRLITDSGAIMAE
ARVFVANGDPFGRGEEEGDGGRVREHELLFRINAQMKAFRKELQGFIDRLELPRPEERRS
EEPLSMFQPIILLILILVLFSSLSYATMFKLVFLFTLFFVL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggaggaaacggcggcggcggcggaggcctcgagccccgcgagccggcaggat
gaggccctgctgcaggacgagctggacagactgcaggatgagaatgacgaactcaaggca
gagattgaggagatgcgcatggaaatggatgagatgcgcgacaccttcttcgaagaggac
acgtgccagctggaggaggtgcggcgtgagctggagcgtgcaaacaaaaactgccgcatc
ctgcagtacagactgcgcaaagccgagcgcagacgcatgcgctatgcgcaaaccggagag
gtagacgaggatgtgctgaggagtctcgagcaggacctgaaggtggcgaaggatgtgtca
gtcaggctgcatcacgagctggagaatgtggaggagaaaagaaccaagactgaagaggag
aacgagaaactgagacaaaaactgattgaggtggaaatcaccaaacagaccctgcagaac
gagctggagaaaaacaaagagtctcaaaagagaagaggcagtaaggacgcccagaaaagc
gaaaggaagcttgcgcagacccccaatgaagacgataacgaggatctaaagtgccagatc
tccttcattaaagaggaggccacgttgatgcggaagaagatggcaacaattgacaaggag
aaggaccgcatggagcaggagctgcaaaagtaccgctccttctacggagacttagacagc
ccccaccccaagggtgaggccgggggtccgcccaccactagagaatctgaactgaagctc
cgccttcgcctggtggaggaggaggccaacatcctgggtcggaagatcgtggagcttgag
gtggagaaccgaggcctgagggccgagctggacaacttgaggggggatgaatcctcgcct
gagggtgcccctggtggagcaaggggaggggccagagagcagggggcggagctttcagag
ctcagacaacagttgcagctggtggaggatgaggcggagctcctgcgtaggaacctggcg
gacgtagaggagcaaaaccggagggtgacgggcgagctgaacaaacttcgcttcaaggaa
ggctggagacatggcagtggctcagcctctgggggcggggcttcagcagcagaaggcttg
gcggagggtggaaagtcagaggctctgcaggaggagcttaaggcagcacggttgcagatt
aacgacctgagtgggaaggtgatgcagctgcagtatgagaaccgtgtgctgctgtccaac
atgcagcgctatgaagtgaccaccgctcacctggacagcgatgctgagagcgagggagcc
ggtggagcgggcggagcaggtggaggagaccgaggaggacgtagagggagcgatgatgac
tcttcttcctcgcgtcttcctccacaccgcaagcgcgagggtcctgtagggggcgagagc
gattcggaggaggtgcggaacagcgcctcccgctgccagcccctgtacactgatgctgga
cgcttcctccctcgctccctgcgtgagcgccagcagatgatggacgtgcgagcggaggcg
gagcgtcttggcaggaccattgaccgcctcatcacagattccggtgccatcatggcagag
gcgcgagtgttcgtggccaatggtgacccgttcgggcgcggggaagaggagggagatggc
gggagggtccgagagcatgagctgctcttccgcattaatgctcagatgaaggccttcagg
aaggagctgcagggttttatagaccggctggagcttcccaggccggaggagagacgttcc
gaggagccgctgtctatgtttcagcccatcattttactcatcctcattctagtactcttc
tcctcactctcttacgccaccatgtttaaacttgttttcctttttacccttttctttgtc
ctgtaa
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