KEGG   Astyanax mexicanus (Mexican tetra): 125780436
Entry
125780436         CDS       T05042                                 
Name
(RefSeq) collagen alpha-1(X) chain-like
  KO
K23284  C1q-related factor
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    125780436
Membrane trafficking [BR:amex04131]
 Endocytosis
  Phagocytosis
   Opsonins
    125780436
SSDB
Motif
Pfam: C1q CCDC39 DUF4349 Cnn_1N Fez1 BclA_C TSC22 Filament Sec2p TPR_MLP1_2 TBCA_PH Speriolin_N Hmw_CFAP97 Rod_CreS YabA Tup_N OVT1 ATG16 DUF4795 PUMA_CC FKBP15 GAS Phage_lysozyme2 ATG14 PI3K_P85_iSH2 Rho_Binding FUT8_N_cat Sipho_Gp157
Other DBs
NCBI-GeneID: 125780436
NCBI-ProteinID: XP_049332443
LinkDB
Position
1:complement(34411442..34414330)
AA seq 278 aa
MKRTVTVTFLLLLLLLQISLQQTRAAADPKSLKRSDDLKNVLYEQGTALAEMKTQVKFIE
KENGDLKTKMTRQIKRSRQTESQLESLKKEMAAQLSEVSVIRSSLVNVEAEMGKLKKENE
DLKKKASTAEGYLKTLKKEITEKLQVAFSAGLSASVGPLSGLGVVVYTKVLTNTGGAYSP
STGVFTAPTAGIYYFRFTACGSANGQYSGVSLYRNQERLTHLSEYNNDGYPRHFSGGIAI
HLSEGDAVTVRLPSSYRLYEDSYTRNIFSGFLLFPMDS
NT seq 837 nt   +upstreamnt  +downstreamnt
atgaagagaacagtgactgttacttttctgttgctgctgctgctgctgcagatcagcctg
caacaaactcgagctgcagctgatccgaagtcactaaaacgctctgatgatctgaaaaac
gttttgtacgagcaaggaaccgcgctggctgagatgaagactcaggtgaagttcatagag
aaggagaacggagacctgaaaaccaaaatgaccagacagatcaaacgttccaggcaaact
gagagtcagctggagagcctaaagaaagaaatggcagcacagttgtcggaggtgtctgta
ataagaagctcactggtgaatgttgaggctgaaatggggaaactgaagaaggagaatgaa
gatctgaagaagaaagcgtctacagctgagggttatctgaagactctaaagaaggaaatc
acagaaaaactgcaggtggcgttctcagcagggctgtctgcatctgtcggacctctgagt
ggtcttggtgtagtggtctacactaaagtcttaacaaacactggaggagcttacagtcca
agcacaggagtcttcacagctcccactgcaggcatctactatttcagattcactgcctgt
ggatcagccaatggtcagtattcaggtgtaagtctctacagaaaccaggagaggctgact
cacctatctgaatacaataatgatggataccctagacacttctctggaggcatcgccata
catctctctgaaggagacgctgttaccgtccgtctcccaagtagttatcgtctgtatgaa
gactcctacactcgcaatattttcagcggcttccttctcttccctatggactcctga

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