Astyanax mexicanus (Mexican tetra): 125780547
Help
Entry
125780547 CDS
T05042
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125780547 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125780547 (tbpl1)
03021 Transcription machinery [BR:
amex03021
]
125780547 (tbpl1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
125780547 (tbpl1)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125780547 (tbpl1)
RNA polymerase III system
TFIIIB
125780547 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
125780547 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
125780547
NCBI-ProteinID:
XP_049318738
LinkDB
All DBs
Position
13
Genome browser
AA seq
189 aa
AA seq
DB search
MEPVEQSNDVALDIIITNVVSVFRTRCHLNLRTIGLEGTNVIYKPEVGKVLMKLRKPRIT
ASIWSSGKIICTGATSEDEAKLGARRLARCLQKIGFKVRFSDFKVVNVLAVCSMPFQIRL
IEFTKNNRPIASYEPEIHPAASYRIKNLRATVQVFSTGSITVTGPNVQSVASAVEQIYPL
LLECQKKLM
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgtggaacagagtaacgatgtggcgctggacatcatcattaccaacgtggtt
tctgtcttcaggacgaggtgccatctgaacctgcgcaccatcggcctggagggcactaac
gtcatctacaaaccagaagtgggaaaagttctaatgaagctgcggaaacctcgaatcact
gcctccatatggtcatcagggaaaatcatttgcactggagcaacaagtgaggatgaagca
aaactcggtgccagaaggttagctcgctgcctccagaagataggattcaaggtgaggttt
tcggactttaaggttgtaaacgtcctggcagtctgctccatgcctttccagatccgtctc
atcgagtttactaagaacaaccgtcccatcgccagctatgagcctgagattcatccagct
gcttcatatagaatcaaaaacctcagggccacagtgcaagtgttttccactggcagcatc
acagtaacaggaccaaatgttcagagtgtcgcctcggctgtggaacagatataccctctg
ctgctcgagtgtcagaaaaaactgatgtga
DBGET
integrated database retrieval system