Astyanax mexicanus (Mexican tetra): 125780979
Help
Entry
125780979 CDS
T05042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125780979
04121 Ubiquitin system [BR:
amex04121
]
125780979
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125780979
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125780979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
DUF659
DBD_Tnp_Hermes
OrsD
Motif
Other DBs
NCBI-GeneID:
125780979
NCBI-ProteinID:
XP_049319458
LinkDB
All DBs
Position
14:complement(9696051..9699309)
Genome browser
AA seq
457 aa
AA seq
DB search
MKRPLILDRYILNRHGTVFVKEPNRTVCLSRRGACVNRTGSTGFFFLQTFEIRIIAKCPY
VTMWFSFVPKKRKRRFVVAWTNMASGSGVGRLPRPEMKDAPALFKSGVWDHFGFPVTYDD
TGNKNVDRTVTICKHCKTRIAYASGNTSNMTGHLRRHHPSVSVKGRRGEPAKKPFTISAA
FKQPLAEDTAKAKSISKAIGIFIAKDMQPYSVVEGEGFRNMIKVLEPRYVMPSRRYFGTN
VIPNLYEETRVDIVKELSEACQIALTTDGWTSRSTESYLTVTAHYITPQWELRSCVLQTR
PIYESHTSEFLSEKLREVVEEWKLERDNGTIPVTTDNAKNIVNAVGLTEGLGPQISCFAH
TVNLAAKSAISTAQISRLLAKVRKVVTFFHRSTTAAFILKTKQDMLTLPDHKLIHDVPTR
WNSTYDMLKRYVEQQAALYSTVTDKNMKKKKPRTFPC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaccactcatcctggacagatatatactaaataggcatggaacggtttttgtg
aaggaaccgaaccgtacggtttgcttgtcacggcgcggggcgtgtgtaaaccgtacaggg
tccacgggttttttttttctccagacgttcgaaattcgcattatagccaaatgcccgtat
gtcaccatgtggttctcattcgtgccaaagaagcgaaagcgaaggtttgtggtggcatgg
acaaacatggcaagtgggagtggagtaggcaggctgcctaggccagagatgaaggatgcc
ccagcattgtttaaatcaggtgtgtgggatcatttcggattccccgtcacatacgatgat
actggcaataaaaacgtggatcgaactgttacaatatgcaagcattgcaaaacccgcatt
gcatacgctagtggaaacacttccaatatgaccggccatttacgaagacatcacccaagt
gtgtcagtaaaggggaggagaggagagcctgccaaaaagccattcacaatcagcgcggca
tttaaacagcccctggctgaggacaccgccaaggcgaaatcaatttccaaagccataggt
atattcattgcaaaggacatgcagccctacagcgtggtggagggtgaaggctttaggaat
atgataaaggtgctggagccgcggtacgtcatgccctctcgtagatactttggcaccaat
gtgataccgaacttatatgaagagacaagggtggacatagttaaggagttatctgaggca
tgccaaatagctctgacgacggatggatggacttccaggtccaccgaaagttaccttaca
gtgactgcccactacattacgccccaatgggagttacgaagctgcgtattgcaaacgcgc
ccaatatatgagagtcacacaagcgaatttctctccgaaaagctaagagaggtggtggag
gaatggaaattggagagggacaacggcaccatccctgtcacgactgacaatgccaagaac
atagtgaatgcagtaggtttgacggagggacttgggccacagatatcctgctttgctcac
acagtcaacctggcagccaaaagcgccatctctacagcccaaatctcacgactgctggcg
aaggtcagaaaggtggtcacctttttccatcgaagcacaacagccgccttcatcttgaaa
acaaagcaggacatgctgacactgccagaccacaagttaattcacgacgtgccaacgcgc
tggaactccacatacgatatgttaaagcgctatgtggagcaacaggcggccctctattcc
acggtgacagacaaaaatatgaaaaaaaaaaagccaaggacatttccctgttaa
DBGET
integrated database retrieval system
