Astyanax mexicanus (Mexican tetra): 125781075
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Entry
125781075 CDS
T05042
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125781075 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
125781075 (capn3a)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
125781075 (capn3a)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C2: calpain family
125781075 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
125781075
NCBI-ProteinID:
XP_049319977
LinkDB
All DBs
Position
14:complement(21640899..21656338)
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AA seq
725 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERKDGEGSVNKPLRFSGQDFNTLKQECLQKKTLFEDETFPATV
ESLGYKELGHKSNKVKNIVWKRPKDICDNPQFIVGGASRTDICQGDLGDCWLLAAIASLT
LNEKLLFRVVPQEQSFSDNYAGVFHFQFWRYGDWVDVVIDDRIPTVNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTATGLVKGHAYSVTAVDECKQNVEKESRVRLVRLRNPWGQVE
WNGPWSDNSKEWTTISKSEKEKLQHQNEEDGEFWMSFDDFKKNYTKLEICNLTPDALDDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACTFVVAL
MQKNRRKERKLGANLFTIGFSIYEVPKEMHGNKQHMQKDFFTVNSSKARSKAYINLREVS
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASAGEES
EEDQHFRTIFQQIAGDVSTGDPGSARGTEMEISASELRNVLNRVVSEQREMNTEGFSLEN
CRSMIALMDMDGTGRLNLQEFRHLWLKIKQWQGIFKHYDTEQTGCICSYEMRNAVNDAGF
RLNNQLYDIITLRYANENMNIDFDSFISCLVRLEGMFRAFQAFDQDGDGTIRLSVLEWLQ
LTMYA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacgccgtctggctttttctgcgaccggttgatccgggagagggagaggaag
gatggagaaggatctgtgaacaagcctctccgattcagtggccaggactttaacaccctg
aagcaggagtgcctccagaagaagaccctgtttgaggatgagacgttccccgccaccgtg
gaatcccttggctacaaggagctgggccacaagtccaacaaggtcaagaacatcgtgtgg
aaaaggcccaaggacatttgtgacaacccacagttcatcgttggaggagccagcagaacc
gacatctgccagggagacctgggagactgctggctgctggcagccatcgcctctctgact
ctgaacgagaagctgctgtttcgggttgttcctcaggagcagagcttctctgacaactat
gctggagtcttccacttccagttctggcgttatggagactgggtggacgtcgtcattgat
gaccggattcccaccgtcaacaaccagctggtgttcaccaagtctgcagagaggaatgag
ttctggagcgcgctcctggagaaggcctatgccaagcttcatggttcctatgaggctctg
aagggtggaaacactactgaggccatggaagacttcactggaggagtgactgagttttat
gagatgaaggaagcacctaaggaactttacaagatcatgaagaaggccttggagagaggc
tctctgatgggctgctctattgattctttggttccagctcgttttgagactcgcaccgca
acagggctggtgaagggtcatgcctactctgtgactgctgtggatgagtgtaaacagaat
gtggaaaaggaatctagagtgcgtctggtgcgtctccgcaatccctgggggcaagtggag
tggaacggcccttggagtgataattcaaaagagtggaccaccatctcaaagtcagagaaa
gaaaaactgcagcatcagaatgaagaagatggagagttctggatgtcctttgatgatttc
aaaaagaactacaccaagctcgagatctgtaacttgacccctgacgctctggatgacgat
aaaatccacaagtggacagtgtctgtgaacgagggccgctgggtgagaggctgctctgct
ggaggctgcaggaactatcctgacaccttctggacaaacccacagtatcgcctgcgtctt
ctggaggaggacgacgacccagaggataatgaggtggcctgcacctttgtggtggctctc
atgcagaaaaacagaaggaaagaacgcaagttgggtgccaatctcttcactattggattt
tccatttatgaggtgccaaaggagatgcatggcaacaagcagcacatgcagaaggacttc
ttcacggtgaactcgtctaaggctcgcagcaaggcctacattaacctgcgggaggtgagt
cagcgcttcaggctgagccccggggagtacgtcatcgtcccctccacttatgagccccac
caggaaggcgagttcatcctccgcgtcttctccgaaaagaggaacacctctgaggagata
gagaacaggatcgaggccgaccacccagtgccggctccagcctcagcaggggaggagagt
gaggaggaccagcatttccgcaccatttttcagcagatagccggggacgtgagtactggg
gatccagggagcgctagggggacagaaatggagatctcggcaagtgagctgcggaatgtc
ttgaacagggtcgtgtctgagcagagagaaatgaatactgaaggcttcagtctggagaac
tgccgtagcatgattgccctcatggatatggacgggactggaagactgaatctacaggaa
ttcagacatttgtggcttaagatcaagcagtggcagggaatctttaagcactatgacaca
gagcagactgggtgcatctgcagctatgagatgagaaacgccgtcaatgatgcagggttc
cgtctcaataaccagctgtacgacatcatcaccctgcgctacgccaacgagaacatgaac
atcgactttgatagcttcatcagctgccttgtgcgattggaggggatgttcagagcattc
caggcattcgatcaggatggagatggaaccatcaggctgtctgtgctggagtggctccag
ctgactatgtatgcctaa
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