Astyanax mexicanus (Mexican tetra): 125781106
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Entry
125781106 CDS
T05042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125781106
04121 Ubiquitin system [BR:
amex04121
]
125781106
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125781106
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125781106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like_helical
ZBED1_RNase-like
zf-BED
DUF659
DBD_Tnp_Hermes
DUF8247
DUF7896
FAM200-ZBED5_RNase-like
OrsD
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
125781106
NCBI-ProteinID:
XP_049320146
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All DBs
Position
14:complement(33783233..33786059)
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AA seq
634 aa
AA seq
DB search
MASGSGVGRLPRPEMKDAPALFKSGVWDHFGFPVTYDDTGNKNVDRTVTICKHCKTRIAY
ASGNTSNMTGHLRRHHPSVSVKGRRGEPAKKPFTISAAFKQPLAEDTAKAKSISKAIGIF
IAKDMQPYSVVEGEGFRNMIKVLEPRYVMPSRRYFGTNVIPNLYEETRVDIVKELSEACQ
IALTTDGWTSRSTESYLTVTAHYITPQWELRSCVLQTRPIYESHTSEFLSEKLREVVEEW
KLERDNGTIPVTTDNAKNIVNAVGLTEGLGPQISCFAHTVNLAAKSAISTAQISRLLAKV
RKVVTFFHRSTTAAFILKTKQDMLTLPDHKLIHDVPTRWNSTYDMLERYVEQQAALYSAV
TDKNMKKKAKDISLLTDSETKLTEGLIDVLKPLKNVTTLMSTETSPSVSMIMPLQRMVLK
AMAPSADDSSTIKDAKAAITKDLQSRYSDHSIQDYLHRATALDPRFKSLPYLDEACVQKI
WDDLTLEIVNLEEQAQQHCEAQAASSYSAAESEPSETSPPPKKSAMATVFADFFTTEARS
TKPLPETIREEVTSYKKTSCISVDEDPLVWWKTNAHKYPHVAKLAQRDLAVPGTSVPSER
VFSTAGDIVTASRSRLLPENVDKLIFMQKNMRIK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgggagtggagtaggcaggctgcctaggccagagatgaaggatgccccagca
ttgtttaaatcaggtgtgtgggatcatttcggattccccgtcacatacgatgatactggc
aataaaaacgtggatcgaactgttacaatatgcaagcattgcaaaacccgcattgcatac
gctagtggaaacacttccaatatgaccggccatttacgaagacatcacccaagtgtgtca
gtaaaggggaggagaggagagcctgccaaaaagccattcacaatcagcgcggcatttaaa
cagcccctggctgaggacaccgccaaggcgaaatcaatttccaaagccataggtatattc
attgcaaaggacatgcagccctacagcgtggtggagggtgaaggctttaggaatatgata
aaggtgctggagccgcggtacgtcatgccctctcgtagatactttggcaccaatgtgata
ccgaacttatatgaagagacaagggtggacatagttaaggagttatctgaggcatgccaa
atagctctgacgacggatggatggacttccaggtccaccgaaagttaccttacagtgact
gcccactacattacgccccaatgggagttacgaagctgcgtattgcaaacgcgcccaata
tatgagagtcacacaagcgaatttctctccgaaaagctaagagaggtggtggaggaatgg
aaattggagagggacaacggcaccatccctgtcacgactgacaatgccaagaacatagtg
aatgcagtaggtttgacggagggacttgggccacagatatcctgctttgctcacacagtc
aacctggcagccaaaagcgccatctctacagcccaaatctcacgactgctggcgaaggtc
agaaaggtggtcacctttttccatcgaagcacaacagccgccttcatcttgaaaacaaag
caggacatgctgacactgccagaccacaagttaattcacgacgtgccaacgcgctggaac
tccacatacgatatgttagagcgctatgtggagcaacaggcggccctctattccgcggtg
acggacaaaaatatgaaaaaaaaagccaaggacatttccctgttaaccgacagtgaaaca
aagctgacagagggcctcattgatgttcttaaacctttgaagaatgtgactaccctgatg
agcacagaaacatctccctctgtctcaatgattatgccactgcagaggatggtactgaaa
gcaatggcaccaagtgcagacgacagttccaccatcaaagatgccaaggcagccatcacc
aaggatcttcaaagcagatacagtgaccatagtattcaggattatctgcacagagccaca
gcactggatcccaggttcaagtccttgccttatctggatgaagcctgcgttcagaaaatc
tgggatgatctcacattggaaattgtaaacctcgaagagcaggctcaacaacactgtgaa
gctcaggcagccagttcatattcagcagcggaatctgagccgtcagagacctctcctccc
cccaagaaatctgccatggcaacagtttttgctgatttttttacaacagaggcaagaagt
acaaagcctttgccagaaaccattcgtgaagaggtcacctcatacaagaaaacaagctgc
atttctgtggatgaagatcccctcgtatggtggaaaaccaacgcacataagtatccccat
gtagcaaagttggcacaacgtgacctggctgtcccaggtacatctgtgccaagtgagcgt
gttttttccacagcaggggacattgtcactgcaagtaggtctcgcctcttgccagaaaat
gttgacaaactgattttcatgcagaagaatatgagaattaagtga
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