Astyanax mexicanus (Mexican tetra): 125781274
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Entry
125781274 CDS
T05042
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04120
Ubiquitin mediated proteolysis
amex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125781274 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125781274 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
125781274 (mgrn1a)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125781274 (mgrn1a)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125781274 (mgrn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125781274
NCBI-ProteinID:
XP_049320838
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Position
15:24243447..24259897
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AA seq
557 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRYPPKTGNYFTSHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADGTIEDAVNPRVLYGV
EFSFDTDARVAITVYCQAFEEFSNGMAVYTPKTPAMVSETVHFKRGINQQFSLPSFKIDF
TKWKSEELNSDLDRGVFPLVIQAVVDDGDDVVGHAHVLLAAFEKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKSPEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKQAGMLTSVSFSPVLSQSSDHTENTNSENIP
PGYEPVSLLEALNGVQAVPSAIPSAPLYEEIRFSGEAADPLNLIRRQQNMVEHSADPAAL
KGSKSPDGSVHSPSSPIQEEEEEERLSELSDAQPHSVLPYSPAPTEATVDGEASEPGSPN
TGSESRTLGMSVSEIMQDCHSARSSLSRTESDPSADMALPGSSGSIESLKSQSTSSSSQP
LLCLPSSLHMEDERLSP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagtacttagtcgaagaattgcgggagtggaagacatcgatattcaagccaat
tctgcttacagatatcctcccaaaacaggaaattacttcaccagtcattttttcatggga
ggggaaaaatttgacaccccgcaccctgagggttatctgttcggagaaaatatggaccta
aatttcctgggcaacagacctgttcagtttccctatgtgacccctgcaccacatgaacct
gtgaagaccctgaggagcctggtgaacatcaggaaggactctttacggcttgttaggtac
aaagatgatgctgacggcacgattgaggacgctgtaaatccaagagtcctgtacggtgtg
gagttctcttttgatactgatgccagagtggccatcactgtatactgtcaggcctttgag
gagttctctaatggaatggcagtgtatactcctaagactccggctatggtgtctgaaaca
gtccatttcaaaagagggataaatcagcagttctctctgccatcctttaagatagatttc
actaaatggaaatcggaggagttaaactctgatttagacagaggtgtattccctcttgtg
attcaggcggtcgtggatgatggagatgatgtcgtaggacatgctcatgtacttttagca
gcatttgaaaagcatgttgacggcagtttttcagtgaagcctttgaagcagaagcaaata
gttgatcgagtgagctaccttctgcaggagatttatggcatcgagaataagaacaaccag
gagactaagtctccagaggatgagaacagtgacaacagcagcgagtgtgtggtgtgtctg
tctgacctgcgtgacacactcatcctcccctgcaggcacctgtgtctctgcaatgcgtgt
gctgacacactgcgttaccaggccaacaactgccctatctgccgactgccttttcgtgca
ctgctgcagatccgtgcagtgaggaaaaaacaggctggcatgctgacttctgtctccttc
agtccagtgctgtcacagagctcagaccacacagaaaatacgaactctgagaacattcct
ccggggtatgagccagtgtctctgctagaagctctgaacggggtgcaggctgtgccttct
gccatcccttcagcccctctctacgaggagatccggttttcaggagaagcagctgaccct
ctgaacctgatcagacgacagcagaacatggtggagcacagcgcagacccagcagcactc
aaaggaagcaagtcacctgatgggtctgtacactctccatcatctcccatccaagaagag
gaggaagaggagagactatcggagctttctgatgctcagcctcactctgtgctgccttac
agtccagctcccactgaggctacagtagatggggaagcctctgaacctggatctccaaac
acaggttcagagagcaggacgcttggtatgtctgtgagtgaaatcatgcaggactgtcac
agtgcccgcagcagcctgagtcgcactgagagtgacccttcagctgacatggctctgcct
ggttcatctgggtctattgagagtctgaagagccagagcaccagcagctccagccagcct
ctgctctgcctccccagcagcctacacatggaggacgagcgcctcagcccatag
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