Astyanax mexicanus (Mexican tetra): 125782637
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Entry
125782637 CDS
T05042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125782637
04121 Ubiquitin system [BR:
amex04121
]
125782637
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125782637
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125782637
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Arteri_GP4
Microp_apicomplexa
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
125782637
NCBI-ProteinID:
XP_049323288
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All DBs
Position
18:20535766..20538882
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AA seq
592 aa
AA seq
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MKRAKRSAVWDHFNIVNLGKEVKCSLCNAVLKYNSSTSSLSYHLNTVHAALLHGTSAPGQ
PKITATLGRRACDERRAEGITERICSMIERDLMPINTVDGAGFQDLIAFLEPGYNTPSRP
SITSRLEARYEKKKGELKTKLATTTAVALTTDCWTALTTESYITVTCHYTDENWQLKSAV
LVTTNMSDRHTADNLADKLNDVVETWGLSSRVTACVHDNARNIVQANNPTRVSWKSVACF
AHTLNLAVNDGFAAAGISRAIVAAGRLVKHFHHSTIAAKALEEKQQQMSLPPHRLIQSCK
TRWNSVFDMFQRLVEQRWAVSAVLSDRSVTKLADARTLELRDDYWQLMEDMAPVLGTLKC
ATTVMSAESEVSISNTYPITFSLINNHLGAADGDSQKVAEFKERVRDSLGERMKIKSDNL
DSSTPMVATMLDPRHKHLGFLPPATRRSAHSKLLELATAERDSVTATGAAAAGDDVNTVQ
TAAPQLHGSTSAMSLLLGETYSNAHKGGVESEVDMYLKDPPALLEQNPTCWWKVNEGRFP
TLAKLAKQYLCTPGTSVPSERVFSAAGLTVNRLRTRLTPDHVNMLIFLNKNI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggcgaaaagaagtgcggtgtgggaccatttcaacattgttaatttaggcaaa
gaagtcaaatgttctctgtgtaatgcggtattaaaatacaacagttctactagctcactc
agttatcatttgaacaccgtgcatgcagctctcttgcatggcaccagtgcacctggtcaa
cctaaaatcacagctacactgggaaggcgagcgtgtgatgagagaagggcagagggcata
acagagaggatatgcagcatgatcgagagagatttgatgccaatcaacacagttgacggt
gcaggatttcaggatctcattgcgttcctagagccaggctacaataccccttcgaggcca
tcaataacctcccgcctcgaagctcgctacgaaaaaaagaagggtgagctaaaaacaaag
ctagctactactactgctgtagccctgacaacagattgttggacggctctaacaacagaa
agttacattaccgtgacgtgccactacactgacgagaactggcagctaaaatctgcagtc
ctggttacgacgaacatgtcggatagacacaccgctgacaatttagctgacaagctcaat
gatgttgtggagacttggggactctccagtcgcgttacagcgtgtgttcacgacaacgct
agaaacattgtccaagcaaacaaccccacacgagtcagctggaaatcagttgcatgtttt
gcacacacgctaaatctcgcagtcaatgatggctttgctgctgctgggataagcagagca
atagtggcagcgggaaggttggtgaaacatttccaccacagcacaatcgcagccaaagcc
ctggaagaaaagcaacagcaaatgtcgcttccaccgcatcgcctcattcaatcctgtaaa
accaggtggaactctgtctttgacatgtttcagcgcctagtcgaacagcggtgggccgtg
tcagccgtgttatcagaccggtccgtgacaaaactggcagatgcgaggacgctggagttg
agagacgactactggcagctaatggaagatatggcacccgtgttgggaaccctgaagtgt
gcaactacggtgatgtctgccgagtcggaggtgtcaatctcaaacacttaccccatcacc
ttcagtctaataaacaatcacctcggcgctgcagacggagacagccaaaaagtcgcagag
ttcaaggaaagagtgcgagattcgctgggcgagcgcatgaagattaagtcagataacctc
gactcatccacccctatggtcgcaactatgcttgaccctcgccacaaacacctgggattt
ctacctccagctaccaggaggtcagctcattccaaactgcttgaactggctacagctgaa
cgcgacagcgtcacagcaacaggtgccgccgccgctggagacgacgtgaacactgtccag
acagcagcgcctcagctacatgggtctacatctgctatgagtttactcctgggtgaaacc
tattccaatgcccacaaaggtggcgtggagagcgaagtggacatgtacttaaaggaccct
cctgcacttcttgagcagaaccccacatgctggtggaaagtgaatgaagggaggtttccg
acgctggcaaaactagcaaaacagtatttgtgtacgccaggcacatcagtcccatctgag
cgtgtattttcagcagctggcctaactgtaaatagactgcgcacacgccttacccctgac
cacgttaacatgctcattttcttgaacaaaaatatatag
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