Astyanax mexicanus (Mexican tetra): 125782658
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Entry
125782658 CDS
T05042
Name
(RefSeq) scavenger receptor class F member 1-like
KO
K24318
scavenger receptor class F member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125782658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
125782658
Membrane trafficking [BR:
amex04131
]
Endocytosis
Phagocytosis
Scavenger receptors
125782658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
125782658
NCBI-ProteinID:
XP_049323330
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All DBs
Position
18:24586176..24595634
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AA seq
431 aa
AA seq
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MEQLGRVLTCLGLLLLCSLASAQKLSPTGKNVCLSPRDSSLVCCSGWAQQGEECTIPLCE
GERSCTQDEVCAFPGVCRCKPGFFGFQCKTRCPPEFWGSDCRELCLCHPHGHCDAATGKC
TCLPTRWGNLCQNNCKCSRHGRCDPVYGNCTCEEGWWTSTCSKPCQCHQGTSTCDQTTGR
CLCKVGYYGLKCSLPCNCYLSPCLQQSGDCQCVKGWWGRNCDRHCICDLSHGDCEQYSGE
CQCEAGYTRPFCHETCSAGFYGRGCTESCGKCEGGKPCSKLDGACDGCAPGWNGTLCDQP
CPPGYYGKLCQNVCPRCRRGEPCHIVTGECSHCDPGWTGPRCSQPCPEGTFGDSCRFLCS
PCYHGRCDHVTGNCVCHSGFQGVRCNSIERTNAAVMKKRDLYLRGEQTRTLKQIALTANL
QNHASETSSAS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctggggagggtcctgacctgcctgggactgctcctcctctgctctctggcc
tccgctcaaaagctctcgcccacagggaagaatgtctgcctcagccccagggactcttct
cttgtgtgttgttctggatgggcccagcagggtgaagagtgcactataccactctgtgag
ggtgagagatcctgcacacaggacgaggtgtgtgcatttccaggagtatgcagatgcaaa
cctggcttctttgggttccagtgtaagactcgctgtccaccggagttctggggctctgac
tgtcgcgagctctgtctgtgccaccctcacggacactgtgatgctgctacgggcaagtgc
acctgcctacccacccgctggggcaacctgtgccagaacaattgtaaatgcagtcgccac
gggcgctgtgatccagtatatggaaactgtacctgtgaagagggctggtggacgtccacc
tgcagtaagccctgccagtgccaccagggcacatccacctgcgaccagaccacggggcgc
tgcctctgtaaagtaggctactatgggctaaagtgcagtctaccctgcaactgctacctc
tcgccctgcctgcagcaatcaggggactgccagtgtgtgaagggctggtggggaaggaac
tgtgaccgccactgcatctgtgacctcagccacggagactgtgaacagtactcaggagag
tgtcagtgtgaggcaggctacacgcggcccttttgtcacgagacctgcagtgcaggcttc
tatgggagaggctgtacagagagctgtggaaaatgtgagggtggtaaaccatgttcgaag
ctggatggcgcttgtgatggctgcgccccaggatggaacggcacactctgcgaccagccc
tgccctccgggatactatggcaagctctgccagaatgtgtgccctcgctgcaggagggga
gagccatgccacatcgtaacaggagagtgctcacactgtgacccaggctggactggacca
aggtgtagccagccatgccctgagggtacctttggggacagttgtcgcttcctctgcagt
ccctgctatcacggccgctgtgaccacgtgacaggaaattgtgtctgccactctggcttt
cagggtgtgaggtgcaacagcatcgagaggacgaatgcagcagtgatgaagaaaagggac
ctttatttgagaggagagcaaacgaggacgttgaaacagattgcactgacagcaaacctg
cagaatcacgcatccgaaacctcttcggcttcctga
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