Astyanax mexicanus (Mexican tetra): 125786909
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Entry
125786909 CDS
T05042
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125786909
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125786909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
125786909
03009 Ribosome biogenesis [BR:
amex03009
]
125786909
04131 Membrane trafficking [BR:
amex04131
]
125786909
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
125786909
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125786909
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125786909
Membrane trafficking [BR:
amex04131
]
SNARE
SNARE associated proteins
Others
125786909
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125786909
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125786909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
125786909
NCBI-ProteinID:
XP_049326497
LinkDB
All DBs
Position
22:complement(14278874..14291380)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
SGPSQGSAGGSGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcggagaatccaaaaatgatgatctttctactgccattctgaagcaaaag
aacagaccaaacaggttgattgttgatgaatctatcaatgaggacaacagcgtggtctca
ctctctcaggcaaagatggacgagcttcagcttttcaggggggacacggtgctgatgaag
ggcaagaaaaggagggaaacggtctgcattgtactgtctgatgacacctgctctgatgag
aaggtgcggatgaacagggtggtccgcaacaaccttagggtacgccttggagatgtcatc
agcattcagccatgcccagatgtgaaatatggaaaacgtatccatgttctgccaattgat
gacacggtggaagggatcactggcaacttatttgaggtttacctcaagccatatttcctt
gaggcctataggccaattcgcaaaggtgatatcttcctggtgagaggaggcatgcgtgct
gtggagtttaaggtagtggagactgaccccagcccttactgcatagtggctccagacact
gtcattcactgtgagggagaaccaatcaagcgtgaggatgaggaggaatctctgaatgag
gtgggttatgatgacattggaggtgtccgaaagcagcttgcccagatcaaagagatggtg
gagctcccacttaggcacccagcactctttaaggcgattggtgtgaagcctccccgtggc
attctgctgtatggaccccctggaactggaaaaactctcattgcccgtgctgttgcaaat
gaaactggagccttctttttccttatcaatggccctgaaatcatgagtaaactggctgga
gaatctgagagcaacctgcgtaaagcctttgaagaagctgagaagaatgcacctgccatt
atctttattgatgaactagatgctattgcacccaagagagagaagactcacggtgaggta
gagaggcgcatcgtgtctcagctgctcaccctgatggacggcctgaagcagagggctcat
gtcattgtcatggcggccaccaacagacccaacagcattgacccagctctcaggcgattt
ggacgctttgacagggaggtggacatcggcattcctgatgctactggacgactggagatc
ctgcagatccacaccaagaacatgaagttggctgatgatgtggacctagagcaggttgcc
aatgagacccatggccacgtgggtgctgatcttgccgccctgtgctcagaagctgcactt
caggccattcgcaagaagatggaccttattgatttggaagatgagacaatcgacgcagag
gtcatgaattctctggctgtcaccatggatgactttaggtgggcgctgagccagagcaac
ccatctgctctgcgtgagactgttgttgaggtgcccaacatcacctgggaggacattgga
ggtcttgatgatgtcaagagggagcttcaggagcttgttcagtatccagtggaacaccca
gacaaattcctgaagtttggtatgaccccatccaagggtgtgttgttctatggaccacct
ggttgtggtaaaactctcttggctaaggctattgccaatgagtgccaggccaacttcatt
tccatcaagggcccagaacttctgactatgtggtttggagagtccgaggccaatgtccgt
gagatctttgacaaggcacgtcaagcagctccatgcgttctcttctttgatgagttggac
tccattgctaaggcccgtggtggaagcgtgggtgatggtggtggagccgcagaccgtgtc
atcaaccagatcctaaccgagatggacggcatgtccagcaagaagaacgtcttcatcatc
ggagccacaaacagaccagacatcatcgaccctgccatcctcaggcctggccgattggac
cagctcatctacatcccactgcccgatgagaagtcacgcatggctattctaaaggccaac
ctcaggaagtctcctatctctaaggatgttgacctggacttcctggccaagatgaccaat
ggcttctctggtgcagacttgactgagatttgccagagggcctgcaagctggctattcgt
gaatccattgagaatgagatcaggagggagcgcgagaggcaaaccaacccctcagcaatg
gaggtggaggaggatgaccctgtgcctgagatcaggaaggaccactttgaagaagccatg
cgctttgctcgccgctctgtcagcgacaatgacatccgcaaatacgagatgtttgcacag
accctgcaacaaagcagaggcttcggcagcttcagattcccctccagtaaccagggagga
agtggaccaagccagggctccgctggtggcagtggagggaacgtcttcaatgaggacaac
gatgatgacctctacggataa
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