Astyanax mexicanus (Mexican tetra): 125787275
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Entry
125787275 CDS
T05042
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125787275 (irx5a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125787275 (irx5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125787275
NCBI-ProteinID:
XP_049327210
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Position
23:complement(9837735..9841607)
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AA seq
495 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAAGSTAFSGASP
AYSSHLPYGADAAAAATFTSYVSSPYDHTSGMAGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEEENIDLEKNDDDEPSKTADKGDTDTETDSKLLHPGDALCDRFTTDTPGKDA
EPLQSDSELKETDARTELLGDPARATTSSPSLLAARDKMPEAAGLAVARGVSALIGGSGV
GHVTSVIHPPSLPLSLPPPPPPPSGGPPAGPPAPSVPKPKLWSLAEIATSSDRCRGSGEA
QTQAAANQAPGNPSPTRTSPQCAPLAGGAVLSRPLYYTTAPFYAGYTNYGTFGHLHGHSH
GHGAGTGAGAGAGAGASSAAAAAAAVAAAAHFNGINQSALNRAEALARDSKGRGQTQLEL
CKDSPYELKKGMSNI
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctatttgtatcagccgtccgcctctttggcgctctactcgtgt
ccggcgtacagcacgagcgtgatctcggggccgcgcacggaggagctcggccgctcgtcc
tcgggctcagcttttgcaccctacgccgccggttccacggcgttcagcggcgcctcgccc
gcctacagctcgcacctcccgtatggcgcggacgcggccgctgccgccaccttcacctcg
tacgtgagttctccgtacgaccacacgtcgggcatggcgggttccatcggctaccacccg
tatgcggcgcctttaggttcctacccgtatggggacccggcataccggaagaacgccaca
cgcgacgccacggccacgctgaaggcctggcttaacgagcaccgaaaaaatccgtatcct
acgaagggcgagaagataatgctggccatcatcactaaaatgaccctcacccaggtgtcc
acctggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacgtggactccg
agaaaccgcagcgaggacgaggaggaagaagagaacatcgacctggagaagaacgacgac
gacgagcccagcaagaccgcggacaagggggacacggacacggagacagactcgaagctg
ctccaccctggcgatgccctgtgtgaccggtttacgacggacacccccggtaaagacgca
gaaccacttcaaagcgattcggagctgaaggagacggacgcgcgcacggagcttcttggg
gaccccgcgcgtgccaccacgtcgtcgccgtcgcttttggccgcgcgtgacaagatgccc
gaggccgcaggcctggcagtggcgcgaggcgtgagcgcgctcatcggcggcagtggtgtc
ggccacgttacctctgtgatccatcctccttctcttcctctttctcttcctcctccacct
cctccaccttctggtggtcccccagccggtccccctgccccgtccgtacctaaacccaaa
ctgtggtcgctggccgaaatcgctacctcgtcggacaggtgcagaggaagcggggaggcg
cagacgcaggccgcagctaaccaggcgcctggaaacccgtcgcccacccggacgtcacct
cagtgtgcgcccttggcgggcggcgccgtactctcgcgccccctgtactacactacggca
ccattttacgcgggctacacgaactacggcactttcggacacctgcacggacatagccat
ggacacggcgccggcacaggtgcgggtgcaggcgcaggcgcgggcgcaagctcggcggcg
gcggcggcggcggcggtggcagcggccgcgcacttcaatggaataaatcagagcgcgctg
aatcgggccgaagctctagcgcgagacagcaagggcagagggcaaacgcagctagagctg
tgtaaagactctccttatgaactcaagaaaggtatgtccaacatttaa
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