Astyanax mexicanus (Mexican tetra): 125787304
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Entry
125787304 CDS
T05042
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125787304 (irx3a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125787304 (irx3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125787304
NCBI-ProteinID:
XP_049327300
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All DBs
Position
23:10221261..10224783
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AA seq
423 aa
AA seq
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MSFPQLGYQYIRPIYPQERQGISGGRNGPELSPSGALSSVLSSMYGSPFAAAQTYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPAFATHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTDEE
GNVYGSDHEGEDGDKREDEEEIDLENIDTENIESKDDLDEQDELHSDLKLDGSCDSEVSD
GYEDLHGPEQKFLKAVVKEGKDVHVDRADHFHHHHHHHHLHHSLDLKMQAPNGEQIKLNQ
IPNSPPNENNAPPAQKPKIWSLAETATTPDNPRKSPQMNGTPSGPGAQTIVPPHRLISCP
VGKIQNWANRAFSAHQLALLNSNHYLGLANQASANGLTLYSNRQAEERSPSSETAATGTC
HPH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggatatcagtacatccggccgatatacccgcaggagagacag
ggcataagcggcgggcgcaacgggccagagctgagcccgtccggcgcactctccagcgtg
ctctcctctatgtacggatctccgttcgctgcagcgcagacctacggagctttcctcccg
tattccaacgacttgtccattttcaaccagctgggggctcagtatgagctaaaggacagt
cctggtgtccagcacccagcattcgccactcatcaccctgctttctacccctacggccaa
tatcagttcggtgatccatccagacctaaaaacgccacccgggagagcacgagtacgctg
aaggcctggctcagcgagcaccgaaaaaacccgtaccccacgaagggtgagaagattatg
ctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgccagg
aggaggctgaagaaggaaaataagatgacgtgggcgccccggaaccgcacggatgaggaa
ggcaacgtgtacggcagcgaccacgaaggggaggacggggacaaacgcgaggacgaggag
gagatcgacttagagaacattgatacggagaacatcgaaagtaaggacgacctagacgag
caggacgagttgcactccgacttgaaactggacggcagctgtgactcggaggtctctgat
ggctatgaggatttacacgggcccgagcaaaagtttttgaaagcggtggtcaaggagggc
aaagatgtgcatgtagaccgggccgaccactttcaccaccaccatcatcatcaccacctc
caccactctctggacctcaaaatgcaggcgcccaatggcgagcaaatcaaactcaaccag
atccccaactctccccccaacgaaaacaacgcgcccccagcccagaaacccaagatctgg
tctctggctgagacggcaacgaccccggacaatccacgcaaatctcctcaaatgaacggg
accccctcggggcctggagcccagaccatcgtccctcctcacagactcatctcgtgccca
gttgggaaaattcagaactgggcaaaccgggcgttttcagcgcaccaactcgcattactg
aactcgaaccactatttgggactggccaaccaggcttcggccaacggcttgaccctctac
tccaacaggcaagcggaggagcggagtcccagctcagagactgcggccacaggtacatgt
caccctcactga
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