Astyanax mexicanus (Mexican tetra): 125787443
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Entry
125787443 CDS
T05042
Symbol
hnrnpa1a
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1a isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125787443 (hnrnpa1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
125787443 (hnrnpa1a)
03041 Spliceosome [BR:
amex03041
]
125787443 (hnrnpa1a)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125787443 (hnrnpa1a)
mRNA cycle factors
Common to processing body (P body) and stress granule
125787443 (hnrnpa1a)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
hnRNP proteins
125787443 (hnrnpa1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
125787443
NCBI-ProteinID:
XP_049327645
LinkDB
All DBs
Position
24:15353236..15360953
Genome browser
AA seq
355 aa
AA seq
DB search
MSKETPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDSNTKRSRGFGFVT
YSSVSEVDAAMNARPHKVDGRAVEPKRAVSREDSCRPGAHSTVKKIFVGGIKEDTDEEHL
RDYFSQFGKIEEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTINGHNCEVRKAL
SREEMNRVSMSPRGGRGGGGGNFGGRGGGYGGGYGGGGGGDRGGYGGDGYGNGYGGNGGY
GGGGPGYGGNRGYGGGGGGGGYGNQGGGGGYGGGGYDNYNGGGGGNFGGGNFGGGGDYND
FGNYNNQSSSNYGPMKGGNYGGGRSGGGGGGGPYGGGYGGGSGGGYGGGSGGRRF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagagactcctcgcgaaccggagcagctccgcaagcttttcatcgggggtctc
agtttcgagaccactgatgagagcctccgggcccattttgaacaatgggggaccctcaca
gactgcgtggtgatgagggactccaacaccaaaaggtcaaggggatttggctttgttaca
tacagttcagtttctgaagttgatgccgctatgaatgcccgcccacacaaagtggatggc
agagccgttgagcctaagagggctgtgtcaagagaggactcttgcaggcctggtgcacat
tcaacagtaaagaagatttttgtggggggaataaaggaggacactgacgaagaacacttg
cgtgactacttcagccaatttggcaaaattgaagaggtgaacatcatgaccgagaagaac
agcgataagaggagggggttcgccttcatcacgttcgatgaccatgacgccgttgatcgg
atagtcatccagaaataccacacgataaacggtcacaactgtgaagttcggaaagctctt
tccagggaagagatgaacagggtctccatgagcccaagaggtggccgtggaggcggtggt
ggaaactttggtggccgaggtggtggatacggaggtggatacggaggtggtggcggaggt
gaccgtggaggatatggtggagatggatatggcaatggctacggagggaacggtggttat
ggtggcggtggtcctggctatggtggaaaccgtggttatggaggaggtggcggcggtggc
ggatacggcaaccagggtggtggaggcggatacggaggtggaggatatgacaattataac
ggcggtggaggaggaaactttggcggtggcaactttggtggcggcggagactataacgac
tttggcaactacaacaaccagtcctcctctaactacggcccaatgaagggcggcaactac
ggcggcggcaggagtggtggtggcggcggtggcggcccatacggtggtggctatggcgga
ggttctggtggtggctatggcggtggttctggtggaaggaggttctag
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