Astyanax mexicanus (Mexican tetra): 125788969
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Entry
125788969 CDS
T05042
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
125788969
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125788969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125788969
NCBI-ProteinID:
XP_049328902
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MRRPSFGEMSTSIGPVPVLPSALDSYAWPDSRSASWISSISRHSPVWGAFPSLSDPSVSC
SGRMEERTQEEPADQGGSEFQTQLDHFRKLGFSQSQVRAALLKVGLNTDTNRVLAELIQA
GGEAEDREKSQSPGAPALVSRGEISRKSFSSISSPTEQEDPPAEEEDDALRPVVIDGSNV
AMSHGNKEVFSCLGIQLAVRYFLERGHSDVTVFVPSWRREQPRPDVPIRDQHILRELEKR
KILVFTPSRRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGEKPEWKRFIEERLL
MYSFVNDKFMPPDDPLGRHGPNLDNFLRRTPRAPKRLPCPYGKKCTYGFKCKFSHPERAK
QSHRSLADELREKAKMTPSPHRTQSSSHGASLEEVMEQKLSLDLKGPVKKTHLSENVPVL
KTGPQSTQRKFPSKRERSGHYSSTSLDSVHATSQELLDSGLGSYEYQSSEHGSQCDQTFR
GEIHRNSSGKHHQHGSRHRTPPPSIQPCSCCSFQSMSSGTSYHHNHHHHHSMDLAGPHNS
QQGVVPYFQPQYNSYGGAPSYLPVNMPQYSLPQDYHHHHHHHSRMPPPHPSHPQHGYWSE
PYGGYNHSPPSPMPGEIAPWGPGKPSPAKASPGKPNSQMLEREQVRKKLLAVFNTHLVDR
AMDLFPNVMDPQKLAVEILNLQSYEGVL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggccttcatttggggagatgagtacaagcatcggcccggtccctgtcctgccc
tctgctttagattcgtacgcctggcccgattctcgtagtgcttcctggatctcctccatc
agcagacactcgcccgtatggggagcttttccctctctgtccgacccgtcagtttcctgt
agcggcagaatggaggagcggacccaggaggagccggcggatcagggcggatcagagttc
cagacccagctggatcatttccgtaagctgggcttctcccagtctcaggtccgagccgcc
ctgctgaaggtgggactgaacacggacactaacagggttctggctgagctgatccaggcc
gggggggaggctgaggaccgggagaagagccagagtcccggagctccggcgctggtgtct
cgtggagagatcagcaggaagtccttcagcagcatttcttcacccacagagcaggaggat
ccacccgccgaggaggaggacgacgccctcagacctgtagtgattgatggcagcaacgta
gctatgagccatggcaacaaggaagtgttctcctgcctgggaatccagctggcggtgagg
tacttcctggagcgaggtcattcagacgttactgtgtttgtgccgtcgtggaggcgggaa
cagccccggccggacgtaccaatcagagatcagcatattctgcgggagctggagaagagg
aagatcctggtgtttactccatcacgacgggtagctggaaagagagtggtctgctatgac
gatcgcttcatcgtcaagctagcgtacgagtccgacggcatcatcgtgtccaacgatacc
taccgtgacctgcagggggagaaaccggagtggaagcgcttcatcgaggagagactcctc
atgtactcctttgttaacgacaaatttatgcccccggatgatcccctcggaagacatgga
cctaatcttgacaactttcttcgcagaactcctcgagctcctaaaaggcttccctgccct
tatggtaagaaatgcacctacggcttcaagtgcaagttcagccaccctgaacgagccaag
cagtcccatcgttccttggcggatgaactgcgagagaaggccaagatgaccccctctcca
cacagaacacaatcatctagccatggtgcttctctggaggaggtgatggagcagaagctc
tccttggatctgaagggacctgttaagaaaactcatttaagcgagaacgtgccagttttg
aagactggaccacagtccactcagaggaagttcccttcaaagcgtgaacgctctggtcac
tactcctcgacaagcttggactctgtccatgctacttctcaggagctcctggactctgga
ctgggctcgtatgagtaccagagctctgagcatggcagccaatgcgatcaaacattcaga
ggagaaattcacaggaattcatcaggaaagcatcaccagcatggcagtcggcaccggacc
ccaccgcccagcatccaaccgtgcagctgctgctccttccagtccatgagttctggcaca
agctaccaccacaaccaccaccaccaccacagtatggacttagctggacctcacaactca
caacaaggtgttgtgccctactttcagcctcaatataactcttatggaggagcaccttca
tacctaccagtgaatatgccccaatatagccttccccaggattaccaccatcaccaccac
caccacagcaggatgcctcctcctcatccttctcatccccaacatggctactggtctgag
ccctatggtggctacaaccattcccctcctagccccatgccgggtgagattgctccatgg
ggtccagggaaacccagcccggccaaagccagccctgggaaacccaactctcaaatgctg
gagagagagcaggttcgtaagaagcttctggcagtttttaacacccatctcgtggacaga
gccatggatttgttccccaacgttatggatcctcaaaaactagctgtggagatactcaat
ctgcagtcctacgaaggggttttatga
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