Astyanax mexicanus (Mexican tetra): 125790024
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Entry
125790024 CDS
T05042
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04371
Apelin signaling pathway
amex04514
Cell adhesion molecules
amex04520
Adherens junction
amex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125790024
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125790024
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125790024
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125790024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
125790024
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
125790024
04090 CD molecules [BR:
amex04090
]
125790024
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125790024
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Major cadherins
125790024
CD molecules [BR:
amex04090
]
Proteins
125790024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
RibLong
Ig_ZP2
DUF6968
DUF4832
VPDSG-CTERM
Motif
Other DBs
NCBI-GeneID:
125790024
NCBI-ProteinID:
XP_049329076
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAGSNCPLTVHAVAANGEVKEETTEIFIVVIDGNDNKPIFTQNPFLGSVAEASPRDFEFM
VANATDADDPDSDHADIRYSIISQTPPQPDPNMFIINPITGGIRVNSDELDRETYPEYIL
LIQAADMMGDGLVTTGTAVITVTDINDHAPQFEKTLYTASVPENKVGSVVVKIPVTDGDD
PQTPAWTANFRIFSGNSGGFFSISTGPNKQEGIITTVKPLDFEQTNKYTLLVITENDVPF
AKPLPTSTATVIVNVQDVNEAPVFDPAETIISKPEDLEVGTELTVYTATDPDTARAQTVT
YRVSNEDRSGWVSIDRDTGLIRVKSSMDRESPLVKDGKFKVLILAVDDDEVPATGTGTLV
IELEDVNDNAPVIEEREITVCSKNSVPVSLSVTDEDGSGFAAPFTVELHEESRNNWTAGM
DDSNTKILLTLKTAIQQGKYSVVLRVYDSSLHSQDSTIITTVCDCTGEDVWCSDREISGF
GLSPILGILGASLALLILVLLLLLFLRKKRSASFFDDNLKAADDDPKAPPYDSLLVFDYE
GCGSEDGSISSLNSSDSG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctggatccaactgcccgcttacggttcatgctgttgcagctaatggtgaggttaag
gaagaaactacggagattttcattgttgtaattgatggaaacgataataagcccatcttc
acccaaaaccctttccttggcagtgttgcagaagcttcacctcgagattttgagttcatg
gtagcgaatgctacagacgcagacgatcctgacagtgaccatgcagacatcagatactcc
atcatcagccagactccaccacagccagatccaaacatgttcatcattaacccgattact
ggagggattagagtgaactctgatgaactggacagagagacttatcctgagtacatcttg
ctgatccaagctgcagatatgatgggtgatggcctcgtcaccactggaacagctgttatt
actgtaactgatatcaacgaccacgcaccacagtttgaaaagaccttgtacactgcatca
gtcccggagaataaagtaggatctgtggtggtgaagataccagtgactgatggagatgat
cctcagactcctgcctggacggccaacttcaggatctttagtggaaacagtggtggattt
ttcagcattagcacaggacccaacaaacaggagggcatcattactactgttaagccattg
gactttgaacagaccaacaagtacactctgctggtgatcacagagaatgatgttccattt
gccaaacccctccctacatccactgctacagtcatcgtgaatgttcaggatgtaaatgag
gcgccagtgttcgacccagcggagaccatcatttctaaacctgaagatctggaagttggt
actgaactaaccgtttacaccgccactgatccagacacagcgagagctcagacagtgaca
taccgtgtatctaatgaagatcgttctggctgggtgagtattgaccgagacactggactg
atcagagtgaagagctccatggacagagaatctcctttagtgaaagatgggaaatttaaa
gttctgatcttggctgtggatgatgatgaagttccagctacaggtacaggaaccctggtg
atcgagctggaagatgtgaacgataacgctcccgttattgaagagagggagatcacagtg
tgcagtaagaactctgttccagtctcactctctgtaacagatgaggatgggtctggtttt
gctgctccgttcactgttgaactccatgaagagagcaggaataactggactgctgggatg
gacgactcaaatactaaaattctacttacgcttaagactgcaatacaacagggaaaatac
agtgtggttctgagggtgtatgattccagcctccacagccaagacagcactatcattacc
actgtatgtgactgcactggagaggacgtctggtgctcagacagggaaatttcaggcttc
ggcctatcacccatccttggaattctgggggcttcactggctttgctaattctggtccta
ttgctactcctgttcctgaggaagaagagatcagcatccttttttgatgataacctgaag
gcggctgatgacgaccccaaagctccaccttacgactctctgctggtgtttgactatgaa
gggtgcggttcagaggatggcagtatcagctctctgaactcctcagactctggatga
DBGET
integrated database retrieval system
